Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_020806.1 Length=11088 Score E Sequences producing significant alignments: (Bits) Value seq103783 187 2e-43 seq103782 86.0 4e-13 >seq103783 Length=304 Score = 187 bits (206), Expect = 2e-43 Identities = 225/302 (75%), Gaps = 8/302 (3%) Strand=Plus/Plus Query 6321 AATGTCGTGGAAGCTGAGAGAATATTTTGTGATCACGGAATATCTAATTAAGACACACTT 6380 |||||| |||| | |||||||||||||||| |||| |||||||||||||| || || || Sbjct 1 AATGTCATGGAGGTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTT 60 Query 6381 TGTACCACTTTTCCACGGCTTGACAATGGCAGATGACATGACGGCTGTAATAAAGAAAAT 6440 ||| ||| | |||||||||||||||||||| ||||| ||| |||| || ||||| || Sbjct 61 TGTCCCATTATTCCACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGAT 120 Query 6441 GTTGGAAAGTTCAAGTGGACAGGGTCTAAAAGATTATTCGGCA---GTATGCATTGCAAA 6497 | |||| | || |||||| || ||| ||| ||| | | |||| ||||| || Sbjct 121 GATGGATAACACATCTGGACAAGG---AAATGATGATTATGAAAATATATGTATTGCCAA 177 Query 6498 CCACATTGACTATGAGAAATGGAACAACCATC-AGAGGAAACGGTCAAATGAACCAATTT 6556 || |||| || ||||||||||| |||| | |||| | | ||| |||| ||| Sbjct 178 TCATGTTGATTACACTAAATGGAACAATCATCAACAGGATGAAG-CTAATAAACCCGTTT 236 Query 6557 TTAAAGTCATGGGTCAATTCTTGGGGTTTCCCAACCTTATATCGAGGACTCATGAATTCT 6616 | |||| |||| | |||| || || ||| |||| | |||||||| |||||||||||| Sbjct 237 TCCAAGTTATGGATAAATTTTTAGGTTTTAACAACTTGATATCGAGAACTCATGAATTCA 296 Query 6617 TT 6618 || Sbjct 297 TT 298 >seq103782 Length=291 Score = 86.0 bits (94), Expect = 4e-13 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 6022 TGGCATGAGTTACCACTCACTCAATGCTTTGAAATTCCTGATTTGATAGACCCTTCTATC 6081 |||||||||||||| | ||| ||| ||||| ||||||||| ||||||| || || || Sbjct 37 TGGCATGAGTTACCTTTAACTGCATGTTTTGAGATTCCTGATATGATAGATCCATCAATA 96 Query 6082 ATCTACTCGGATAAAAGTCACTCCATGAATCGACAAGATGTACTAAATCATGTAAAGAGA 6141 || || || ||||||||||| || ||| | | ||| ||| | || ||| |||| | Sbjct 97 ATATATTCAGATAAAAGTCATTCTATGGACCAGTCAGAGGTATTGAAACATATAAAAACG 156 Query 6142 AAACCAGATCAACCTATACC 6161 | || || ||||| |||| Sbjct 157 TATCCGAATAAACCTGTACC 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35268100550064