Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_024473.1 Length=11123 Score E Sequences producing significant alignments: (Bits) Value seq103783 109 4e-20 seq103782 78.8 7e-11 >seq103783 Length=304 Score = 109 bits (120), Expect = 4e-20 Identities = 202/294 (69%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 6265 ATGTCATGGAGATTAAGGGAATATTTTGTGATCACGGAGTACTTAATCAAAACATACTAC 6324 ||||||||||| || || ||||||||||| |||| || || |||| ||||| | | Sbjct 2 ATGTCATGGAGGTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTT 61 Query 6325 GTTCCCTTGTTTAAGGGGTTAACTATGGCAGATGACCTCACATCGGTGATTAAGAAGATG 6384 || || || || | || || || ||||| ||||| | | | || || ||||||||| Sbjct 62 GTCCCATTATTCCACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATG 121 Query 6385 ATGGACAGTTCATCAGGTCAAGGGCTCGATGATTATTCATCAGTTTGTTTGGCTAACCAT 6444 ||||| | |||| || ||||| ||||||||| | | ||| | || || ||| Sbjct 122 ATGGATAACACATCTGGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAATCAT 181 Query 6445 ATTGACTACGAGAAGTGGAATAACCATCAAAGAAAGGAATCTAATGGTCCCATCTTCAGA 6504 |||| ||| || ||||| || |||||| | ||| ||||| ||| | ||| | Sbjct 182 GTTGATTACACTAAATGGAACAATCATCAACAGGATGAAGCTAATAAACCCGTTTTCCAA 241 Query 6505 GTCATGGGACAGTTTCTGGGTTAT-CCATCACTCATAGAGAGAACTCATGAATT 6557 || |||| | ||| | |||| | || | | ||| ||||||||||||||| Sbjct 242 GTTATGGATAAATTTTTAGGTTTTAACAAC-TTGATATCGAGAACTCATGAATT 294 >seq103782 Length=291 Score = 78.8 bits (86), Expect = 7e-11 Identities = 85/113 (75%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 5942 AAATTCAAGACTTTGGTGACAATTGGCACAAGCTTCCATTAATTCAATGTTTTGAAATAC 6001 |||| | ||||| || || | ||||| || | || |||| | ||||||||| || | Sbjct 14 AAATCCTTGACTTCGGAGATCACTGGCATGAGTTACCTTTAACTGCATGTTTTGAGATTC 73 Query 6002 CTGATTTAATAGACCCATCGGTGATTTATTCAGACAAAAGTCATTCCATGAAC 6054 ||||| | ||||| ||||| | || |||||||| ||||||||||| ||| || Sbjct 74 CTGATATGATAGATCCATCAATAATATATTCAGATAAAAGTCATTCTATGGAC 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35379789250684