Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_025255.1 Length=11135 Score E Sequences producing significant alignments: (Bits) Value seq103783 156 3e-34 >seq103783 Length=304 Score = 156 bits (172), Expect = 3e-34 Identities = 215/297 (72%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 6327 ATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTATTTGATTAAGACGCACTTT 6386 ||||| |||| | | ||||| |||||||| ||||||| ||| | ||||| ||||| ||| Sbjct 2 ATGTCATGGAGGTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTT 61 Query 6387 GTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACAGCGGTGATAAAGAAGATG 6446 ||||| | || | || ||||| ||||| ||||| |||| | || || ||||||||| Sbjct 62 GTCCCATTATTCCACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATG 121 Query 6447 ATGG---ACACATCTTCAGGACAAGGCTTAGATAATTATGAATCCATTTGTATAGCCAAC 6503 |||| |||||||| |||||||| ||| |||||||| || ||||| ||||| Sbjct 122 ATGGATAACACATCT---GGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAAT 178 Query 6504 CATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAGTCGAACGGGCCCGTGTTC 6563 ||| |||| || || ||||||||||||||| | || | || ||||| ||| Sbjct 179 CATGTTGATTACACTAAATGGAACAATCATCAACAGGATGAAGCTAATAAACCCGTTTTC 238 Query 6564 AAGGTGATGGGTCAATTCTTGGGATAT-CCACGTCTGATTGAGAGAACTCATGAATT 6619 | || |||| | |||| || || | | || | |||| ||||||||||||||| Sbjct 239 CAAGTTATGGATAAATTTTTAGGTTTTAACAACT-TGATATCGAGAACTCATGAATT 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35418082519468