Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_025395.1 Length=11876 Score E Sequences producing significant alignments: (Bits) Value seq103783 78.8 7e-11 >seq103783 Length=304 Score = 78.8 bits (86), Expect = 7e-11 Identities = 174/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 7059 TGAGATTGTACTTCGTTATCTCGGAATATTTAATTAAAAAAGACATAGTAAAACTCTTTG 7118 ||||| || || ||| || | |||||| ||||||||| | | || | | || Sbjct 15 TGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTTGTCCCATTATTCC 74 Query 7119 ATGGTTTAACTATGGCAGATAGTTTCATAGATGTGATTAACAAAATGTTGAGTAGAACAA 7178 | || || || ||||| ||| ||| | ||| || || || ||| || || ||| Sbjct 75 ACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATGATGGATAACACAT 134 Query 7179 ATGGACAAGCTCACTGTACTTATGACAAGATTACTTTTGCCAATCATATAGATTATAGTA 7238 |||||||| | | |||||| || || | ||||||||||| | ||||| | || Sbjct 135 CTGGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAATCATGTTGATTACACTA 194 Query 7239 AATGGAATAATCATCAGAGAGATGAAGC-AGTAGGTCCCGTATTCAGTGTGATGGATAAA 7297 ||||||| |||||||| |||||||| | || ||||| ||| || ||||||||| Sbjct 195 AATGGAACAATCATCAACAGGATGAAGCTAATA-AACCCGTTTTCCAAGTTATGGATAAA 253 Query 7298 -TGTTATGGATTAACAA 7313 | ||| | ||||||| Sbjct 254 TTTTTAGGTTTTAACAA 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37782691866880