Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_028236.1 Length=11072 Score E Sequences producing significant alignments: (Bits) Value seq103783 118 7e-23 >seq103783 Length=304 Score = 118 bits (130), Expect = 7e-23 Identities = 207/300 (69%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 6284 ATGTCTTGGAAGCTGAGAGAGTATTTCGTGGTGACGGAGTACTTGATAAAGGAGCATTAC 6343 ||||| |||| | ||||||| ||||| || || || || || | || || ||||| Sbjct 2 ATGTCATGGAGGTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTT 61 Query 6344 GTTCCTTTATTTAATGGGCTGACAATGGCTGATGACATGACAACAGTTATATCCAAGCTG 6403 || || ||||| | || |||||||||| ||||| ||| || ||||| ||| || Sbjct 62 GTCCCATTATTCCACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATG 121 Query 6404 ATGGATAGAACGCAGGGGCAAGGAGGGAGTGATTATTCTCAAA---TCTGTATTGCAAAT 6460 ||||||| || || |||||| | |||| ||| | ||| | |||||||| ||| Sbjct 122 ATGGATAACACATCTGGACAAGGA---AATGATGATTATGAAAATATATGTATTGCCAAT 178 Query 6461 CATATAGATTATGAGAAGTGGAACAATCACCAAAGAAAGGATGCCACTGGTCCAGTTTTC 6520 ||| | ||||| || ||||||||||| ||| | || || | | || |||||| Sbjct 179 CATGTTGATTACACTAAATGGAACAATCATCAACAGGATGAAGCTAATAAACCCGTTTTC 238 Query 6521 AAAGTCATGGGTCAGTTTTTGGGGTATCCCAATTTAATATACCGGACACATGAATTCTTT 6580 |||| |||| | | ||||| || | | ||| || |||| | || ||||||||| || Sbjct 239 CAAGTTATGGATAAATTTTTAGGTTTTAACAACTTGATATCGAGAACTCATGAATTCATT 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35217042858352