Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_028239.1 Length=16133 Score E Sequences producing significant alignments: (Bits) Value seq103783 145 8e-31 >seq103783 Length=304 Score = 145 bits (160), Expect = 8e-31 Identities = 200/280 (71%), Gaps = 0/280 (0%) Strand=Plus/Plus Query 11358 TGAGGGAGTACTTCGTATTTACTGAATACCTAATTAAAGAGCATTTTGTACCATTATTTA 11417 |||| || || || || | |||||||| ||||||||| ||||||||| |||||||| Sbjct 15 TGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTTGTCCCATTATTCC 74 Query 11418 AGGGTCTGACTATGGCTGATGACTTACAAACAGTTATTAAGAAGATGATAGATGTGTCTT 11477 | || |||| ||||| ||||| || | || ||||| ||||||||||| ||| | | Sbjct 75 ACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATGATGGATAACACAT 134 Query 11478 CTGGTCAAGGCACTGAGACATATGAGAATATCACCATTGCAAATAACATAGATTATGAGA 11537 |||| ||||| | ||| ||||| ||||| ||||| ||| | | ||||| | Sbjct 135 CTGGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAATCATGTTGATTACACTA 194 Query 11538 AATGGAATAATTATCAAAGGTATGAATCTAATCATGCAATATTCACAGTGATGGGGCAAT 11597 ||||||| ||| ||||| | ||||| ||||| | | | ||| ||| |||| ||| Sbjct 195 AATGGAACAATCATCAACAGGATGAAGCTAATAAACCCGTTTTCCAAGTTATGGATAAAT 254 Query 11598 TTTTAGGGTATCCAAAGTTAATTGCAAGAACTCATGAGTT 11637 ||||||| | | || || || | ||||||||||| || Sbjct 255 TTTTAGGTTTTAACAACTTGATATCGAGAACTCATGAATT 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 51360061136224