Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_028255.1 Length=11003 Score E Sequences producing significant alignments: (Bits) Value seq103783 120 2e-23 seq103782 89.7 4e-14 >seq103783 Length=304 Score = 120 bits (132), Expect = 2e-23 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 6225 ATGTCTTGGAAATTACGTGAATATTTTGTAATCACGGAATATCTTATCAAAACACACTTT 6284 ||||| |||| || | ||||||||||| |||| |||||||| || ||||| || ||| Sbjct 2 ATGTCATGGAGGTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTT 61 Query 6285 GTCCCCATGTTCAAGGGACTAACCATGGCAGATGATCTAACTGCTGTCATCaaaaaaaTG 6344 ||||| | ||| | || | || ||||| |||||| | | |||| ||||| || ||| Sbjct 62 GTCCCATTATTCCACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATG 121 Query 6345 TTGGATACATCCTCAGGTCAAGGATTGGACAATTACGAGTCCATTTGTATCGCGAATCAC 6404 |||||| | || || |||||| || |||| || || ||||| || ||||| Sbjct 122 ATGGATAACACATCTGGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAATCAT 181 Query 6405 ATTGATTATGAGAAATGGAACAACCATCAAC 6435 ||||||| ||||||||||| ||||||| Sbjct 182 GTTGATTACACTAAATGGAACAATCATCAAC 212 >seq103782 Length=291 Score = 89.7 bits (98), Expect = 4e-14 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 5910 GACTTCGGAGACCTGTGGCATGAACTTCCTTTAACCAAATGTTTTGACATCCCTGACTTA 5969 ||||||||||| | |||||||| | |||||||| ||||||||| || ||||| | Sbjct 22 GACTTCGGAGATCACTGGCATGAGTTACCTTTAACTGCATGTTTTGAGATTCCTGATATG 81 Query 5970 ATAGACCCCTCAATCATTTATTCGGATAAAAGTCACTCAATG 6011 ||||| || ||||| || ||||| ||||||||||| || ||| Sbjct 82 ATAGATCCATCAATAATATATTCAGATAAAAGTCATTCTATG 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34996856562844