Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_031278.1 Length=12247 Score E Sequences producing significant alignments: (Bits) Value seq103783 143 2e-30 seq103782 82.4 6e-12 >seq103783 Length=304 Score = 143 bits (158), Expect = 2e-30 Identities = 208/294 (71%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 7362 ATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGATTAAAACCCATTTT 7421 ||||| ||| || |||| ||||||||| | || || ||||| |||||||| |||||| Sbjct 2 ATGTCATGGAGGTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTT 61 Query 7422 GTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAGTAGTACGCAAGATG 7481 || || | || | || |||||||||| |||||| ||| || || | |||||| Sbjct 62 GTCCCATTATTCCACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATG 121 Query 7482 ATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAGGAATTGCCAATCAC 7541 ||||| ||||| |||||| || |||||||||||| | ||| | ||||||||||| Sbjct 122 ATGGATAACACATCTGGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAATCAT 181 Query 7542 TTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAGAACCTGTATTCACA 7601 | ||||| || ||||| ||||| ||| | || ||| |||| || ||| | Sbjct 182 GTTGATTACACTAAATGGAACAATCATCAACAGGATGAAGCTAATAAACCCGTTTTCCAA 241 Query 7602 GTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTCATGAGTTC 7655 || |||| ||||| | || | | || || || ||||||||||||| ||| Sbjct 242 GTTATGGATAAATTTTTAGGTTTTAACAACTTGATATCGAGAACTCATGAATTC 295 >seq103782 Length=291 Score = 82.4 bits (90), Expect = 6e-12 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 7046 TGACTTCGGTGATCACTGGCATCAATTGCCGCTCAAAAAATGTTTTGACATACCGGATAT 7105 ||||||||| |||||||||||| | || || | | ||||||||| || || ||||| Sbjct 21 TGACTTCGGAGATCACTGGCATGAGTTACCTTTAACTGCATGTTTTGAGATTCCTGATAT 80 Query 7106 GTTTGATCCTTCCACGTTGTATTCAGATAAGAGTCACTCTATGAACAAGAACGAGGTA 7163 | | ||||| || | | ||||||||||| ||||| |||||| || || |||||| Sbjct 81 GATAGATCCATCAATAATATATTCAGATAAAAGTCATTCTATGGACCAGTCAGAGGTA 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38966592093452