Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_031301.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq103783 129 4e-26 seq103782 118 7e-23 >seq103783 Length=304 Score = 129 bits (142), Expect = 4e-26 Identities = 214/304 (70%), Gaps = 10/304 (3%) Strand=Plus/Plus Query 6334 AATGTCATGGATGTTGCGAGAATATTTTGTGATAACAGAATATTTAATCAAGGAGAATTA 6393 ||||||||||| |||| ||||||||||||| | || |||||| |||| || | ||| Sbjct 1 AATGTCATGGAGGTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTT 60 Query 6394 CGTTCCTCTGTTTAGTGGATTGACAATGGCTGATGATTTGACAACTGTCATATCA--AAA 6451 || || | || || ||||||||||| |||||||||| ||||| ||||| || Sbjct 61 TGTCCCATTATTCCACGGCTTGACAATGGCCGATGATTTGAACACTGT--TATCAAGAAG 118 Query 6452 TTGTTAGATAGGAGTCAGGGACAAGGTGGTAAAGATTACACTAATATTTGTATCGCAAAT 6511 || | |||| | |||||||| | | ||||| ||||| ||||| || ||| Sbjct 119 ATGATGGATAACACATCTGGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAAT 178 Query 6512 CATATTGACTATGAGAAATGGAACAACCATCAA-AGAA--AAGCTGCAACTGATCCAGTT 6568 ||| |||| || ||||||||||| |||||| || | ||||| | | | || ||| Sbjct 179 CATGTTGATTACACTAAATGGAACAATCATCAACAGGATGAAGCT---AATAAACCCGTT 235 Query 6569 TTCAAGGTCATGGGAGAGTTCTTAGGATATCCCAACTTATTCACAAGAACTCACGAATTC 6628 ||| | || |||| | || ||||| | | |||||| | | |||||||| |||||| Sbjct 236 TTCCAAGTTATGGATAAATTTTTAGGTTTTAACAACTTGATATCGAGAACTCATGAATTC 295 Query 6629 TTTC 6632 ||| Sbjct 296 ATTC 299 >seq103782 Length=291 Score = 118 bits (130), Expect = 7e-23 Identities = 179/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 6002 ACTCCAAAACAAATTGAGGACTTTGGAGATAAATGGAATGAGTTGCCTTTAACAAAATGT 6061 ||||| |||||||| ||||| |||||| | ||| ||||||| |||||||| |||| Sbjct 4 ACTCCTAAACAAATCCTTGACTTCGGAGATCACTGGCATGAGTTACCTTTAACTGCATGT 63 Query 6062 TTTGATATCCCTGATATAATTGATCCCAGTTTACTTTATTCAGATAAGAGTCACTCTATG 6121 ||||| || |||||||| || ||||| || | ||||||||||| ||||| |||||| Sbjct 64 TTTGAGATTCCTGATATGATAGATCCATCAATAATATATTCAGATAAAAGTCATTCTATG 123 Query 6122 AATAGGGATGAAGTTATTAATCATGTTTCAAGGTATCCAAATGTCCCTATTCCAACAAAA 6181 | | || || | || ||| | || |||||| ||| ||| | ||| ||||| Sbjct 124 GACCAGTCAGAGGTATTGAAACATATAAAAACGTATCCGAATAAACCTGTACCATCAAAA 183 Query 6182 AAGGTCTTAGATACATTACTACATACTAAAAGTACCAATTGGCCTGTGTTTTTACAAGAA 6241 ||||| | ||| ||||| || | | | ||| |||||| | ||| | ||||| Sbjct 184 AAGGTGTAAGAGTCATTATTAAAGAAATTAGATACTAATTGGAAAGAATTTCTCAAAGAA 243 Query 6242 ATTAACGATCATGGA 6256 || | || |||||| Sbjct 244 ATAGATGAACATGGA 258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35315967136044