Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_031691.1 Length=11238 Score E Sequences producing significant alignments: (Bits) Value seq103783 167 2e-37 >seq103783 Length=304 Score = 167 bits (184), Expect = 2e-37 Identities = 215/297 (72%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 4477 AAAGAATTCATGGGTTCTAGATATTAAGTTGGGGTATCCCAAAAATTGTCCCATTACCTT 4536 || ||||||||| ||||| ||||| |||||| | || ||||||| |||| || | Sbjct 298 AATGAATTCATGAGTTCTCGATATCAAGTTGTTAAAACCTAAAAATTTATCCATAACTTG 239 Query 4537 GAATGTGGGATTATTGGCTGCTCCCCTCTGATGATTGTTCCATTTTTCATAATCTACATG 4596 ||| ||| ||||| ||| | || ||||||||||||||||| ||||| ||||| Sbjct 238 GAAAACGGGTTTATTAGCTTCATCCTGTTGATGATTGTTCCATTTAGTGTAATCAACATG 179 Query 4597 GTTGGCAAAGCTTACATGATCATAATTATCCGTACCTTGACCATATGTGTTGTCCATTAA 4656 ||||||| | || || ||||||| ||| | ||||| ||| ||||||| ||||| | Sbjct 178 ATTGGCAATACATATATTTTCATAATCATCATTTCCTTGTCCAGATGTGTTATCCATCAT 119 Query 4657 TTTTTTAGTCAAAACGGTGGAGTTATCTGCCATGGTTAGACCTTTAAATAATGGGACAAA 4716 || || | | | | | | | ||| ||||| || | || | |||||||||||||| Sbjct 118 CTTCTTGATAACAGTGTTCAAATCATCGGCCATTGTCAAGCCGTGGAATAATGGGACAAA 59 Query 4717 ATGCTTCTTGATCAGATATTCTGTTATTACGAAGTATTCTCTCAACTCCCAGGACAT 4773 |||| | || || |||||||| || | || || |||||||||||| ||| ||||| Sbjct 58 ATGCGTTTTAATTAGATATTCAGTGACAACAAAATATTCTCTCAACCTCCATGACAT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35746766409864