Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_012698.2 Length=8995 Score E Sequences producing significant alignments: (Bits) Value seq2244 78.8 5e-11 >seq2244 Length=16338 Score = 78.8 bits (86), Expect = 5e-11 Identities = 109/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 7215 AAAGTTGACTTGCCAGAACCACAAGGAACAGTTGAGGAAATTATCAAAGAAAAAGTACGT 7274 ||| |||| ||||| ||| ||||| |||||||||||| || | ||||||| | Sbjct 15707 AAAATTGATTTGCCGGAATTGCAAGGTGAAGTTGAGGAAATAATTATAGAAAAATCAAAG 15766 Query 7275 GTAGCGTCTGAGTTGA-TTGGAGGGCCAGTTCTCGTAGAAGATACAAGTTTGTGTTTTGA 7333 | ||| || || || || ||| |||||| | || || ||||| ||||||| ||| | Sbjct 15767 GAAGCAGCT-AGAAGAGTTAAAGGACCAGTTGTTGTTGAGGATACTTGTTTGTGCTTTAA 15825 Query 7334 TGCTCTCAATGGTCTCCCAGGACCATACAT 7363 ||| |||||||| | || ||||| ||||| Sbjct 15826 TGCACTCAATGGCTTACCTGGACCCTACAT 15855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28660406312900