Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_025358.1 Length=15024 Score E Sequences producing significant alignments: (Bits) Value seq161124 86.0 6e-13 >seq161124 Length=1101 Score = 86.0 bits (94), Expect = 6e-13 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 10085 AGCTACGAATTGGCCTGAATTTCTTAAAGCAATTAATGATCACGGACTAGATTGGGAAAA 10144 ||| ||||||||||| ||||| || ||| | || |||| ||| || ||| ||| || Sbjct 117 AGCAACGAATTGGCCGGAATTCCTCAAAACCATCGATGAGGTCGGGCTTGATCAGGACAA 58 Query 10145 ATTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTT 10201 | |||||||||| |||||||| || || | || | ||||||||||| ||||| || Sbjct 57 ACTGGTGATTGGATTGAAAGCCAAAGAGAGGGAGCAAAAAGAAGAAGGAAGATTTTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47862800369881