Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= NC_014791.1 Length=9070 Score E Sequences producing significant alignments: (Bits) Value seq54 84.2 1e-12 >seq54 Length=4029443 Score = 84.2 bits (92), Expect = 1e-12 Identities = 178/266 (67%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 7320 GTCGAAGATACATGTCTCTGCTTTAATGCTTTCAATGGACTTCCTGGGCCATACATAAAA 7379 || ||||| || | | || || ||||| || || || | || || || ||||| ||| Sbjct 2675382 GTTGAAGACACTTCATTATGTTTCAATGCATTAAAAGGCTTGCCAGGTCCTTACATTAAA 2675323 Query 7380 TGGTTTTTAAAAGAATTGGGTCTTGAAGGTGTTGTTAAAATGCTGTCAGCATTTGGAGAT 7439 |||||| | | || | | | ||||| || |||| | ||| ||| ||||| |||| Sbjct 2675322 TGGTTTCTTGATAAACTTGAACCGGAAGGACTTCATAAACTACTGGCAGGATTTGAAGAT 2675263 Query 7440 AAATCAGCGTACGCACTATGCACATTCGCATATGTGCACAATGAATTGTCTGATCCGGTT 7499 ||||| || | ||| | |||||||| || | | | | |||| ||||| | || Sbjct 2675262 AAATCTGCACAAGCAATCTGCACATTAGCTTTTACACGCGATGAGAATTCTGAAGTGATT 2675203 Query 7500 GTGTTTAAAGGAGTTGTAAATGGTGAAATTGTGCCGCCACGAGGTAACAATGGTTTTGGT 7559 | ||| | ||||| || ||| ||||| | || |||||| | |||||| Sbjct 2675202 CTCTTTCAGGGAGTAACTAACGGTACTATTGTAGCTCCTCGAGGTTGTCGAGACTTTGGT 2675143 Query 7560 TGGGATCCTATATTTAAACCTGACGA 7585 ||||||||||||||| |||| || || Sbjct 2675142 TGGGATCCTATATTTCAACCAGATGA 2675117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28901071702088