Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_001560.1 Length=11161 Score E Sequences producing significant alignments: (Bits) Value seq121975 86.0 4e-13 >seq121975 Length=4353 Score = 86.0 bits (94), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 6760 AGAG-GGTGGACTGGAAGGTCTACGGCAAAAAGGATGGACTATCCTCAATCTACTGGTTA 6818 |||| ||||| ||||||| || |||||||||||||| | || || || || | | Sbjct 814 AGAGTGGTGGGATGGAAGGCCTGAGGCAAAAAGGATGGCCAATTGTCGGACTCCTTGCGA 873 Query 6819 TTCAAAGAGAGGCTAAAATCAGAAACACTGCTGTCAAAGTCTTGGCACAAGGTGATAATC 6878 || | |||||| | | ||||||||| || ||||| ||||||||| ||||||| Sbjct 874 TTAACAGAGAGATTTTACAAAGAAACACTTTGGTAAAAGTTCTGGCACAAGAAGATAATC 933 Query 6879 AAGTTATTTGCACACAGTATAAAA 6902 ||||||| || ||| |||||||| Sbjct 934 AAGTTATATGTACAATGTATAAAA 957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35515367541500