Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_002803.1 Length=11019 Score E Sequences producing significant alignments: (Bits) Value seq121975 123 2e-24 >seq121975 Length=4353 Score = 123 bits (136), Expect = 2e-24 Identities = 258/382 (68%), Gaps = 2/382 (1%) Strand=Plus/Plus Query 6219 CTCATCATTGGATTGAAAGGGAAAGAAAGAGAGCTTAAGATTGCGGGGAGATTCTTCTCT 6278 || || || ||||| | || |||||| |||| | || ||||| || |||| ||| || Sbjct 295 CTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCT 354 Query 6279 CTGATGTCATGGCAATTGAGGGAGTACTTTGTAATTACAGAGTATCTGATCAAGACACAT 6338 | ||||| ||| | || |||||||| | | ||||| ||||||| |||| Sbjct 355 TTAATGTCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACAT 414 Query 6339 TATGTTCCGCTCTTCAAGGGATTAACGATGGCCGACGATCTAACCTCTGTGGTAAAGAAG 6398 ||||| || || || ||||||||||| ||||| |||||| ||| | | ||||||| Sbjct 415 TATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAG 474 Query 6399 ATGTTAGATAACACTAATGGGCAAGGCTTGGACGACTACTCATCTATATGCATTGCGAAC 6458 ||| | || | ||| || ||||| | ||| | ||| | || || || || || Sbjct 475 ATGATGGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAAT 534 Query 6459 CACATTGATTATGAAAAATGGAACAATCATCAACGGAAAGAATCCAATGGGCCTGTATTT 6518 || | ||||| |||||||| || |||| | |||||| ||||| |||||||| Sbjct 535 CATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTC 594 Query 6519 CGAGTCATGGGTCAATTCTTAGGATACCCTCGA-CTGTTTGAAAGGACACATGAATTCTT 6577 ||| ||||| ||||| | || | || | | ||| ||| || |||||| |||| Sbjct 595 AAAGTGATGGGACAATTTCTTGG-TGCCGAGAATTTATTTACAAGAACGCATGAAATCTT 653 Query 6578 TGAGTCAAGTCTCATTTATTAT 6599 |||| ||| | || || ||| Sbjct 654 TGAGAGGAGTTTAATCTACTAT 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35062047794004