Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_007020.1 Length=11440 Score E Sequences producing significant alignments: (Bits) Value seq121975 118 8e-23 seq34844 80.6 2e-11 >seq121975 Length=4353 Score = 118 bits (130), Expect = 8e-23 Identities = 212/307 (69%), Gaps = 2/307 (1%) Strand=Plus/Plus Query 6586 ATAGGTCTAAGACCAAAAGAGAGAGAACTGAAGAGAGCTGGTAGGTTTTTTGCCCTGATG 6645 ||||| ||||| ||||||| ||||| |||| | |||||||| | ||| || | ||| Sbjct 301 ATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATG 360 Query 6646 AGTTGGGAGCTCAGAGAGTACTTCGTTTTTACTGAGTATCTGATTAAGGAACATTTCATT 6705 |||||| ||| ||||| || || | ||||| |||| || |||||| | Sbjct 361 TCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTA 420 Query 6706 CCTCTTTTTAAGGGGTTGACGATGGCCGATGATATGACCGGAGTCATCAAGAAACTGCTA 6765 || || |||||||| || || ||||| || ||| | | | | | ||||| || | Sbjct 421 CCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATG 480 Query 6766 GAGTGCTCCAACGGCCACGG-AGAAACAGATTACTCAAATATAACCATATCAAATCACTT 6824 || || | || || || | | ||| ||||| | || ||| ||||||| || Sbjct 481 GAAACTTCTATGGGTCAAGGTATAGACA-ATTACGACTACATTTGTATAGCAAATCATTT 539 Query 6825 AGATTACTCGAAATGGAACAATCATCAAAGATATGAATCCAACAAATATGTATTCCAAGT 6884 |||||||||||||||||| || |||| ||| | ||| |||| || ||||||| |||| Sbjct 540 AGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGT 599 Query 6885 GATGGGA 6891 ||||||| Sbjct 600 GATGGGA 606 >seq34844 Length=5462 Score = 80.6 bits (88), Expect = 2e-11 Identities = 105/140 (75%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 7296 AATCAACAAAGACGAAACAATGCAAAGTGCAGACTTTTTAATTTATGGCAAGGTGCCAAT 7355 ||| || |||| |||||||| |||||||| || | | | | ||| || || || || || Sbjct 4086 AATAAATGAAGATGAAACAATTCAAAGTGCCGATTATCTTAATTACGGTAAAGTTCCCAT 4027 Query 7356 ATTTAGGGGAAACA-TCACGATACCTGAATCCAAGAAGTGGTCTCGAGTCAACTGC-GTA 7413 | |||||||||||| ||| | || ||||||| |||| ||||||||| | | || | | Sbjct 4026 AATTAGGGGAAACATTCATG-TATCTGAATCAAAGAGATGGTCTCGACT-AGCTACATTG 3969 Query 7414 ACAAATGATCAGTTGCCCAC 7433 | ||||| |||||||| || Sbjct 3968 TCTAATGACCAGTTGCCTAC 3949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36406045073552