Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_008514.1 Length=11545 Score E Sequences producing significant alignments: (Bits) Value seq121975 86.0 5e-13 >seq121975 Length=4353 Score = 86.0 bits (94), Expect = 5e-13 Identities = 278/422 (66%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 8537 GAATCCAAGGGCAGATTGCCAGCTTACTTAGGATCAAAGACATCAGAGACCACCAGCATC 8596 ||||||| || ||| | || || || |||||||| ||||| || || ||||| Sbjct 2224 GAATCCAGAGGACCATTTGCGGCATATTTGGGATCAAAAACATCTGAATTTACGAGCAT- 2282 Query 8597 ATCCAA-CCATGGGACAGAGAAACAAACATCCCAATGATCAAAAGAGCAGCCAAGCTGAG 8655 || | || ||||| | ||| || ||| || || || |||||||| || || || | Sbjct 2283 ATATAGGCCTTGGGAAAAAGAGACCTCCATACCCATCATAAAAAGAGCTGCAAATTTGCG 2342 Query 8656 GAATGCCATATCCTGGTTTGTGAACCCAGACTCCAATCTAGCAAAAAGCATAATGAACAA 8715 ||||| ||| |||||| | || || || || ||| |||| || | || Sbjct 2343 AAATGCAATAGGTTGGTTTATAAATAAGGAGTCTAAATTAGGAAAATCGATTTGTCAGAA 2402 Query 8716 TTTAGAAGGACTCACTGGCGAAAAATGGGATG-GTGCAT-TGGAGGGATTCAAACGAACT 8773 |||| | | || || ||| | || | || ||| | || |||| ||||| Sbjct 2403 TTTAACATCTTTAACAGGAGAAGATTGTTCTAAGTCCATATCCAGTTTCTCAA--GAACT 2460 Query 8774 GGGTCTGCTCTGCACCGTTTCTCCAGTGCTCGAGTCAGCTCAGGTGGCTTTTCCGCACAG 8833 || || || || || | ||||| || ||||| ||| |||| || | | | || || Sbjct 2461 GGTTCAGCCCTACATAGATTCTCATGTTCTCGACAAAGCGCAGGAGGATATGCAGCTCAA 2520 Query 8834 AGTCCTGCAAAATTGACAAGGATGATGTCCACAACTGATACCTTTTGGGGCATAGG--GA 8891 ||||||| |||| | || || ||||| || || || ||||| ||| | | || | || Sbjct 2521 AGTCCTGTAAAACTAACGAGAATGATTTCTACCACCGATAC-TTTAGAAGAATTGAATGA 2579 Query 8892 CCGACAATTACGACTTCATGTTTCAGTCCTTGCTAATCCACTCACAGATCACAACAGGCG 8951 | ||||| ||||||||||| ||| | ||||||||| | || || || ||||| || | Sbjct 2580 TAAA-AATTATGACTTCATGTTCCAGACTTTGCTAATCTAATCTCAAATTACAACTGGGG 2638 Query 8952 AA 8953 || Sbjct 2639 AA 2640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36741246295292