Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_013135.1 Length=12390 Score E Sequences producing significant alignments: (Bits) Value seq121975 91.5 1e-14 >seq121975 Length=4353 Score = 91.5 bits (100), Expect = 1e-14 Identities = 217/324 (67%), Gaps = 3/324 (1%) Strand=Plus/Plus Query 7566 CTTATTATAGGATTGATGGCAAAAGAAAGAGAACAGAAAATCGATGGGAGGTTCTTCTCT 7625 || || |||||||| | ||||||||| ||||| |||||| | ||| || | ||| || Sbjct 295 CTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCT 354 Query 7626 TTAATGTCTTGGGACATCCGCGACTACTTTGTCATGACTGAATACCTCATTAAGACCCAC 7685 |||||||| ||||| | | ||||||||| | | || ||| | || || || Sbjct 355 TTAATGTCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACAT 414 Query 7686 TTTGTCCCCTTATTCAAAGGGCTGACCATGGCAGATGACCTCACAACAGTAATTGGCAAG 7745 | ||| || |||| || || | ||||||||||| || | | ||| ||| ||| Sbjct 415 TATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAG 474 Query 7746 ATATTGGAGAACTCTCGGGGTC-AGGGAGAGGCAGACTATGAGAACTTGACTATCACTGA 7804 || |||| | ||| ||||| ||| | || || | || || || | ||| | | Sbjct 475 ATGATGGAAACTTCTATGGGTCAAGGTATAGACA-ATTACGACTACATTTGTATAGCAAA 533 Query 7805 TCACATTGACTATGAAAAATGGAACAACCACCAGAGAGGGGAAGCCAACAATCCAATCTT 7864 ||| | || || |||||||| ||| | |||||| |||||||| ||||| | || Sbjct 534 TCATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATT 593 Query 7865 CTTGGTCATGGG-GAAGTTCTTGG 7887 | || ||||| || ||||||| Sbjct 594 CAAAGTGATGGGACAATTTCTTGG 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39438818032152