Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_013955.1 Length=15764 Score E Sequences producing significant alignments: (Bits) Value seq121975 104 2e-18 >seq121975 Length=4353 Score = 104 bits (114), Expect = 2e-18 Identities = 255/380 (67%), Gaps = 10/380 (3%) Strand=Plus/Plus Query 10993 ATTGGACTCAAAGCAAAAGAAAGAGAAGTAAAGTTAGTTGGAAGGtttttttCTTTAATG 11052 || ||| | | |||||||||| ||||| | || | | ||| || | ||| |||||||| Sbjct 301 ATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATG 360 Query 11053 ACATGGGA-ACTCAGAGAATATTTCGTATGTACAGAGTATATGATCAAACAGTTCTTCAT 11111 | ||||| ||| ||| || || || | | ||||| |||||||||| | | Sbjct 361 TCCTGGGAGACT-AGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGT 419 Query 11112 TCCCCTGTTTCAAGGCCTGACTATGGCTGATGATATGCAAGAGGTCCTTAAAAAATTACT 11171 || || ||| | || | || ||||| || ||| | || | | |||| ||| | Sbjct 420 ACCACTATTTAAGGGATTAACCATGGCAGACGATTTA-AATA---CATTAACAAAGAAGA 475 Query 11172 --AAGCAG--TTCTAGTGGTCAAGGTTTAGACAATTACAACTTGATCTCAATTGCCAATC 11227 | | | ||||| ||||||||| ||||||||||| ||| || | || || |||| Sbjct 476 TGATGGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAATC 535 Query 11228 ATTTTGATTATGAAAAATGGAATAATCATCAAAGATATGCTTCAAATTGCCATGTGTTTA 11287 |||| ||||| ||||||||||| |||| ||| | | | ||| | ||| || | Sbjct 536 ATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCA 595 Query 11288 AAGTCATGGGACAATGTTTTGGTTTACCCAATCTGTTCCTGCGTACACATGAATTCTTTG 11347 |||| |||||||||| | ||||| ||| | || | || |||||| |||||| Sbjct 596 AAGTGATGGGACAATTTCTTGGTGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTG 655 Query 11348 AGAAAAGCTTGATCTATTAT 11367 ||| || || ||||| ||| Sbjct 656 AGAGGAGTTTAATCTACTAT 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50203434849017