Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_017685.1 Length=14717 Score E Sequences producing significant alignments: (Bits) Value seq34844 127 2e-25 >seq34844 Length=5462 Score = 127 bits (140), Expect = 2e-25 Identities = 191/270 (71%), Gaps = 6/270 (2%) Strand=Plus/Minus Query 10069 ATCGCTAATCATTTGGATTATGAGAAGTGGAATAACTATCAAAGAAAAGAGTCCAATGGC 10128 || ||||| || ||||||||| ||||||||||| |||| || ||||| | || | Sbjct 4571 ATAGCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAACAAC 4512 Query 10129 CCTGTGTTCCGAGTCATGGGTCAATTTTTGGGCTTACCTAATTTAATAGAAAGAACTCAT 10188 || || ||| ||||||||| |||||| |||| ||| ||||| | ||||||||| Sbjct 4511 CCAGTTTTCAAAGTCATGGGACAATTTATGGGAGCACCCAATTTGTTTACGAGAACTCAT 4452 Query 10189 GAGTTTTTTGAAAAAAGTCTTATTTATTACAATGGGAGGCCTGACTTGATGACAGTGCGT 10248 ||| |||| ||||| ||| | |||||||| || ||| ||| || |||||||| ||| Sbjct 4451 GAGATTTTCGAAAATAGTTTAATTTATTATCCTGCTAGGGGTGATTTAATGACAGTACGT 4392 Query 10249 GGTAAAGAAGTGATCTCAAATAAAGGGGAAGT---TGTTTGTTGGGAGGGTCAAAAAGGA 10305 || |||| || ||||| || | ||||| ||| ||||||| | ||| Sbjct 4391 AACAATCAAGTTGTC---AATAATTCAGACCTGCGAGTTTGCTGGCAGGGTCAGAGTGGA 4335 Query 10306 GGCTTAGAAGGATTGAGACAAAAAGGGTGG 10335 || | |||||| | |||||||| || ||| Sbjct 4334 GGAATGGAAGGACTAAGACAAAAGGGTTGG 4305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46861221058280