Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_017714.1 Length=15867 Score E Sequences producing significant alignments: (Bits) Value seq121975 190 2e-44 >seq121975 Length=4353 Score = 190 bits (210), Expect = 2e-44 Identities = 333/482 (69%), Gaps = 2/482 (0%) Strand=Plus/Plus Query 10914 ACCAACAAGAAGAGTACTGAAAACATTATTAGAGAAACCTGCGACAATTTGGCCTGAATT 10973 |||||||| || ||| | | ||||||| ||| | |||| | ||| ||||| || || Sbjct 195 ACCAACAAAAAAGGTATTAACAACATTACTAGGAACCCCTGATATAATATGGCCAGACTT 254 Query 10974 TCTTAAAAAAGTCAATGATTTTGGATTGGATTGGGAGAGTTTGGTAATTGGGTTAAAAGC 11033 | | || ||| | |||||| ||||||| || | | | || |||| || |||| ||| Sbjct 255 TGTGAAGAAAATTAATGATGTTGGATTAGACTTGAATTCACTGATAATAGGATTAAGAGC 314 Query 11034 AAAGGAAAGGGAATTGAAGGATGCAGGTAGATTCTTTTCATTGATGAGTTGGGAGTTAAG 11093 ||| ||| | ||| |||| ||| ||||||| || | || ||| |||||| || Sbjct 315 AAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATGTCCTGGGAGACTAG 374 Query 11094 AGAGTATTTTGTATTCACAGAGTATTTGATTAAAGAACATTTTGTGCCATTATTCAAAGG 11153 | || ||||| || | ||||| ||||| ||| |||||| ||| ||| |||| || || Sbjct 375 ATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTACCACTATTTAAGGG 434 Query 11154 ATTAACTATGGCAGATGATCTACAAACTGTAATTAAAAAGATGATTGATGTATCAGCAGG 11213 |||||| |||||||| ||| || | || ||| || |||||||| || || || Sbjct 435 ATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGGAAACTTCTATGGG 494 Query 11214 ACAAGGTACTGAAACCTATGAAAACATAACAATAGCGAATAATATTGACTATGAGAAGTG 11273 ||||||| || | || || |||| ||||| ||| || | || || ||| || Sbjct 495 TCAAGGTATAGACAATTACGACTACATTTGTATAGCAAATCATTTAGATTACTCGAAATG 554 Query 11274 GAATAATTATCAAAGATATGATTCAAATAGTGCAATTTTCACTGTCATGGGACAATTTTT 11333 |||||| |||| ||| | || | |||| | | | |||| || |||||||||||| | Sbjct 555 GAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGATGGGACAATTTCT 614 Query 11334 AGGGTATCCA-AAGTTAATAGCAAGAACTCATGAGTTTTTTGAGAAAAGCCTGATCTACT 11392 ||| | | || ||| | ||||||| ||||| | ||||||| || | ||||||| Sbjct 615 -TGGTGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGAGTTTAATCTACT 673 Query 11393 AT 11394 || Sbjct 674 AT 675 Score = 82.4 bits (90), Expect = 8e-12 Identities = 113/156 (72%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 14436 TGCAACGGGAGCACATTATAAGATAAGGTCTATATTAAAAAACATGAATTTGAAATATCA 14495 |||||| |||||||||||||| || ||| |||||| | || |||||| | || ||| Sbjct 3726 TGCAACAGGAGCACATTATAAACTAGGGTGTATATTGCATAATATGAATATTAATTATAC 3785 Query 14496 AGACTTCTTATGTGGAGGAGATGGGTCAGGAGGGATTACTTCTTGTTTAATTAG--AGAA 14553 | | || | |||| |||||||| || ||||| || || ||| ||| | || | || Sbjct 3786 AAATTTTATTTGTGCTGGAGATGGATCTGGAGGAATGACATCTAAATTACTAAGGAACAA 3845 Query 14554 TCACCTACATCAAGAGGGATATTCAATAGTCTATTA 14589 ||| || ||||| ||||| | |||||| ||||| Sbjct 3846 TCA--TAACTCAAGGGGGATCTATAATAGTTTATTA 3879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50532229519930