Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_020804.1 Length=13298 Score E Sequences producing significant alignments: (Bits) Value seq121975 107 2e-19 >seq121975 Length=4353 Score = 107 bits (118), Expect = 2e-19 Identities = 217/319 (68%), Gaps = 5/319 (2%) Strand=Plus/Plus Query 8383 ATAGGATTAAAACCCAAAGAGAGAGAAATGAAAAGAACTGGTCGttttttttCATTGATG 8442 |||||||||| | | ||||| |||||||||||| ||||| | | ||| | || ||| Sbjct 301 ATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATG 360 Query 8443 ACATGGAACTTACGGAATTATTTTGTCATGACTGAGTTATTAATTAAAGAACACTTCATA 8502 | ||| | | ||| |||||| | | |||| || || ||| |||| | || Sbjct 361 TCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTA 420 Query 8503 GGACTATTCAACGGTTTAACCATGGCTGATGACTTACAAGGATTAATTAAGAAGTTGTTG 8562 |||||| || || ||||||||||| || || ||| | ||||| |||||| || || Sbjct 421 CCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATG 480 Query 8563 GATAGAACTACTGGGCAAGGTGATTCAAAAATTA--AAAAGATAAACATTGCAAACGGCT 8620 || | ||| || |||||| | | ||||| | | || || ||||| | Sbjct 481 GAAACTTCTATGGGTCAAGGT--ATAGACAATTACGACTACATTTGTATAGCAAATCATT 538 Query 8621 TAGATTACACGAAATGGAATAATTACCAGAGATATGATTCCAACAGATATGTGTTTAGAG 8680 |||||||| ||||||||||||| | |||||| | || |||| | ||| || | || Sbjct 539 TAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAG 598 Query 8681 TAATGGGTCAATTT-TTGG 8698 | ||||| |||||| |||| Sbjct 599 TGATGGGACAATTTCTTGG 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42331515834731