Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_020805.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq121975 174 1e-39 >seq121975 Length=4353 Score = 174 bits (192), Expect = 1e-39 Identities = 267/377 (71%), Gaps = 4/377 (1%) Strand=Plus/Plus Query 6305 ATCGGATTAAAAGGAAAAGAAAGAGAACTGAAGATTGCAGGTAGATTTTTCTCATTGATG 6364 || ||||||| || ||||||| ||||| |||| ||||| ||||||| |||| | || ||| Sbjct 301 ATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATG 360 Query 6365 TCTTGGAAGCTTAGGGAATACTTTGTTGTCACAGAGTATTTGATCAAGACTCACTTTGTG 6424 || ||| || ||| |||||||| | | ||||| |||||||| || | ||| Sbjct 361 TCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTA 420 Query 6425 CCATTGTTCCATGGGCTGACCATGGCTGATGATATGACAGCAGTGATCAAAAAGATGCTG 6484 ||| | || | || | |||||||| || ||| | | || | | || |||||| || Sbjct 421 CCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATG 480 Query 6485 GAAAGCTCGTCTGGTCAAGGGCTAACAAACTACGACAGCGTTTGTATTGCAAATCATATT 6544 |||| || |||||||| || || |||||| | ||||||| ||||||||| | Sbjct 481 GAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAATCATTTA 540 Query 6545 GACTATGAAAAATGGAATAATCATCAACGAAAATTGTCCAATGGACCTGTGTTTAAAGTC 6604 || || ||||||||||| |||| ||||| ||||| ||||| || ||||| Sbjct 541 GATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTG 600 Query 6605 ATGGGACAA-TTCTTGGGTTATCCAAATTTGATATAC-CGGACACATGAGTTTTTTGAGA 6662 ||||||||| ||||||| | | | | || || ||| | || ||||| | ||||||| Sbjct 601 ATGGGACAATTTCTTGG--TGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGA 658 Query 6663 AAAGTTTAATTTACTAT 6679 |||||||| |||||| Sbjct 659 GGAGTTTAATCTACTAT 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35384479445392