Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_020806.1 Length=11088 Score E Sequences producing significant alignments: (Bits) Value seq34844 152 4e-33 >seq34844 Length=5462 Score = 152 bits (168), Expect = 4e-33 Identities = 455/693 (66%), Gaps = 22/693 (3%) Strand=Plus/Minus Query 6486 ATGCATTGCAAACCACATTGACTATGAGAAATGGAACAACCATCAGAGGAAACGGTCAAA 6545 ||| || || |||||| | || ||| || ||||| || ||||||||||| |||| Sbjct 4575 ATGTATAGCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAA 4516 Query 6546 TGAACCAATTTTTAAAGTCATGGGTCAATTCTTGGGGTTTCCCAACCTTATATCGAGGAC 6605 | ||| |||| ||||||||||| ||||| |||| ||||| | | |||| || Sbjct 4515 CAACCCAGTTTTCAAAGTCATGGGACAATTTATGGGAGCACCCAATTTGTTTACGAGAAC 4456 Query 6606 TCATGAATTCTTTGAGAAAAGTCTCATCTATTATAATGGAAGGCCTGATTTGATGAAGGT 6665 |||||| | || || || ||| | || |||||| || ||| |||||| |||| || Sbjct 4455 TCATGAGATTTTCGAAAATAGTTTAATTTATTATCCTGCTAGGGGTGATTTAATGACAGT 4396 Query 6666 GC--AAGATGGAAGACTTGTGAACACAACGAAGCAATTGGTTTGTTGGGAAGGACAGGCA 6723 | || | ||| |||| || | | | | ||||| ||| | || ||| Sbjct 4395 ACGTAACAATCAAG--TTGTCAATAATTCAGACCTGCGAGTTTGCTGGCAGGGTCAGAGT 4338 Query 6724 GGCGGATTAGAGGGGTTAAGACAGAAGGGATGGAGCATCTTAAACTTATTGGTTATTCAA 6783 || ||| | || || ||||||| ||||| ||| ||| || ||| | || | Sbjct 4337 GGAGGAATGGAAGGACTAAGACAAAAGGGTTGGTCAATCGTAGGGTTACTTTCCATCAAC 4278 Query 6784 AGGGAATCCAAGATT----CGGAACACAGCAGTTAAAGTCCTTGCACAAGGTGATAATCA 6839 || ||| | ||| || |||||| ||| ||||| | || || || || || || Sbjct 4277 AGAGAA----ATATTACAACGAAACACATTAGTAAAAGTATTAGCTCAGGGAGACAACCA 4222 Query 6840 AGTAATATGCACACAGTACAAGACAAAA--CAACACAGAAATGAAACAGAATTGC-GATC 6896 |||||||||||| ||| |||| | || | | | || ||| | || || || Sbjct 4221 AGTAATATGCACCATGTATAAGATACAATCCTATTCTGA--TGATAGCGAGTTAATGAAA 4164 Query 6897 TGC-TCTTACTCA-AATGAAATTGAATAATGATGCAGTTATGAAAGCCATTGAATCTGGA 6954 | || | | ||| ||| |||||||| || | |||||||| |||||| ||| Sbjct 4163 AACATCGAAAATATAATAAAA---AATAATGAAGCTATCATGAAAGCTATTGAAAGAGGA 4107 Query 6955 ACAAACAAACTAGGTTTGTTGATCAACCAAGATGAAACAATGCAATCAGCTGACTACCTG 7014 || | ||||| || ||| || || ||||||||||||| ||| || || || || Sbjct 4106 GCAGAAAAACTTGGGTTGGAAATAAATGAAGATGAAACAATTCAAAGTGCCGATTATCTT 4047 Query 7015 AATTACGGTAAAGTTCCCATATTTAGAGGAGTGATACGAGGTTTAGAAACAAAAAGGTGG 7074 ||||||||||||||||||||| |||| ||| || | | | ||| |||| || ||| Sbjct 4046 AATTACGGTAAAGTTCCCATAATTAGGGGAAACATTCATGTATCTGAATCAAAGAGATGG 3987 Query 7075 TCACGAGTGACTTGTGTAACAAATGACCAACTTCCCACCTGTGCAAACTTGATGTCATCA 7134 || ||| | || | | |||||||| | || ||| ||||| | | |||||| Sbjct 3986 TCTCGACTAGCTACATTGTCTAATGACCAGTTGCCTACCCTAGCAAATATATTATCATCA 3927 Query 7135 GTGTCTACTAATGCCCTTACTGTTGCTCATTTT 7167 || |||| ||| | || | ||| |||||||| Sbjct 3926 GTCTCTAGTAACTCTCTAAATGTATCTCATTTT 3894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35282322882576