Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_022755.1 Length=10692 Score E Sequences producing significant alignments: (Bits) Value seq121975 93.3 3e-15 >seq121975 Length=4353 Score = 93.3 bits (102), Expect = 3e-15 Identities = 241/365 (66%), Gaps = 2/365 (1%) Strand=Plus/Plus Query 5941 CTTATTATAGGCCTCAAAGCAAAGGAACGTGAGTTGAAAACCGTAGGTCGGTTCTTCTCT 6000 || || ||||| | | |||||| ||||| || |||||| | ||| | | ||| || Sbjct 295 CTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCT 354 Query 6001 CTAATGTCTTGGAAATTAAGAGAATACTTCGTGATAACAGAGTATCTCATAAAGACTCAT 6060 ||||||| ||| | ||| ||||| || ||| ||||| | || || ||| Sbjct 355 TTAATGTCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACAT 414 Query 6061 TTTGTTCCTTTGTTTCACGGGCTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAA 6120 | ||| || | ||| | || | |||||||| ||||| | | | | | ||||| Sbjct 415 TATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAG 474 Query 6121 ATGATGGAGTCATCTTCAGGACAAGGCGCCTCCGACTATGATGCCATTGCCATTGCGAAC 6180 |||||||| | ||| || ||||| | | || || |||| || || || Sbjct 475 ATGATGGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAAT 534 Query 6181 CATATTGACTATGAAAAATGGAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTC 6240 ||| | || || |||||||||||| |||| | |||||| ||||| |||||| ||| Sbjct 535 CATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTC 594 Query 6241 AGAGTCATGGGTCAGTTCCTAGGGTATCCAAATTTAATTTAC-CGGACGCATGAGTTTTT 6299 | ||| ||||| || || || ||| | | | || |||||| | |||||||| | || Sbjct 595 AAAGTGATGGGACAATTTCT-TGGTGCCGAGAATTTATTTACAAGAACGCATGAAATCTT 653 Query 6300 TGAGA 6304 ||||| Sbjct 654 TGAGA 658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34018135417728