Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025255.1 Length=11135 Score E Sequences producing significant alignments: (Bits) Value seq121975 167 2e-37 seq34844 105 5e-19 >seq121975 Length=4353 Score = 167 bits (184), Expect = 2e-37 Identities = 296/428 (69%), Gaps = 4/428 (1%) Strand=Plus/Plus Query 6218 AGAGTTTTTAAAGAAAATTGACGAAGAGGGGTTAGAGGATGATGATCTTGTCATAGGACT 6277 ||| ||| | ||||||||| | || | || ||||| || || | |||||| | Sbjct 249 AGACTTTGTGAAGAAAATTAATGATGTTGGATTAGACTTGAATTCACTGATAATAGGATT 308 Query 6278 CAAAGGGAAAGAGAGAGAATTAAAAATTGCGGGAAGATTCTTTTCTTTGATGTCCTGGAA 6337 | || ||||| ||||| | |||||||| || |||| || |||| ||||||||| | Sbjct 309 AAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATGTCCTGGGA 368 Query 6338 GCTCAGAGAGTATTTTGTCATCACTGAGTATTTGATTAAGACGCACTTTGTCCCGATGTT 6397 | ||| || |||||| | | ||||| ||||| || || | ||| || | || Sbjct 369 GACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTACCACTATT 428 Query 6398 TAAAGGGTTGACCATGGCGGATGACTTGACAGCGGTGATAAAGAAGATGATGGACACATC 6457 ||| || || |||||||| || || || | | | | ||||||||||||||| || || Sbjct 429 TAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGGAAACTTC 488 Query 6458 TTCAGGACAAGGCTTAGATAATTATGAATCCATTTGTATAGCCAACCATATTGACTATGA 6517 | || ||||| |||| ||||| || | |||||||||||| || ||| | || || Sbjct 489 TATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAATCATTTAGATTACTC 548 Query 6518 GAAGTGGAACAATCATCAAAGAAAAGAGTCGAACGGGCCCGTGTTCAAGGTGATGGGTCA 6577 ||| ||||| || |||| |||||||| | || || || ||||| |||||||| || Sbjct 549 GAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGATGGGACA 608 Query 6578 A-TTCTTGGGATATCCACGTCTGATTGA-GAGAACTCATGAATTTTTTGAGAAGAGTCTG 6635 | ||||||| | | | | ||| | ||||| |||||| | ||||||| |||| | Sbjct 609 ATTTCTTGG--TGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGAGTTTA 666 Query 6636 ATATATTA 6643 || || || Sbjct 667 ATCTACTA 674 >seq34844 Length=5462 Score = 105 bits (116), Expect = 5e-19 Identities = 358/553 (65%), Gaps = 10/553 (2%) Strand=Plus/Minus Query 6492 TGTATAGCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAGTCGAAC 6551 |||||||| ||||| | || ||| |||||||| ||| |||| || ||||| | ||| Sbjct 4574 TGTATAGCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAAC 4515 Query 6552 GGGCCCGTGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAGAGAACT 6611 || || ||||| || ||||| ||||| ||||| || | || || ||||||| Sbjct 4514 AACCCAGTTTTCAAAGTCATGGGACAATTTATGGGAGCACCCAATTTGTTTACGAGAACT 4455 Query 6612 CATGAATTTTTTGAGAAGAGTCTGATATATTACAATGGACGACCAGATCTGATGCGGGTT 6671 ||||| |||| || || ||| | || ||||| || | ||| | ||| || Sbjct 4454 CATGAGATTTTCGAAAATAGTTTAATTTATTATCCTGCTAGGGGTGATTTAATGACAGTA 4395 Query 6672 CGAGGAAATTCTCTAGTCAACGCCTCATCTTTAAATGTCTGCTGGGAGGGTCAAGCTGGG 6731 || ||| | ||||| ||| | || |||||| ||||||| ||| Sbjct 4394 CGTAACAATCAAGTTGTCAATAATTCAGACCTGCGAGTTTGCTGGCAGGGTCAGAGTGGA 4335 Query 6732 GGATTAGAAGGACTGCGACAGAAGGGATGGAGTATTCTAAATTTGCTTGTCATTCAGAGA 6791 ||| | |||||||| |||| ||||| ||| || || || ||| ||| | ||| Sbjct 4334 GGAATGGAAGGACTAAGACAAAAGGGTTGGTCAATCGTAGGGTTACTTTCCATCAACAGA 4275 Query 6792 GAAGCAAAAATAAGGAACACCGCCGTGAAAGTGCTAGCTCAAGGTGACAATCAGGTGATA 6851 ||| | | | | ||||| || ||||| ||||||| || ||||| || || ||| Sbjct 4274 GAAATATTACAACGAAACACATTAGTAAAAGTATTAGCTCAGGGAGACAACCAAGTAATA 4215 Query 6852 TGTACTCAGTATAAAACGAAGAAATCC----CGGAATGATATTGAGCTTAAGGCAGCTC- 6906 || || |||||| || ||||| | | |||||| ||| |||| | | | Sbjct 4214 TGCACCATGTATAA---GATACAATCCTATTCTG-ATGATAGCGAG-TTAATGAAAAACA 4160 Query 6907 TAACACAGATGGTATCTAATAATGAGATGATTATGTCTGCGATTAAATCAGGCACCGAGA 6966 | | | || || |||||||| || ||| || ||| || ||| | || | Sbjct 4159 TCGAAAATATAATAAAAAATAATGAAGCTATCATGAAAGCTATTGAAAGAGGAGCAGAAA 4100 Query 6967 AACTGGGTCTTTTGATTAATGATGATGAGACAATGCAATCTGCTGATTACCTCAATTACG 7026 |||| || | || ||||| ||||| ||||| ||| ||| ||||| || ||||||| Sbjct 4099 AACTTGGGTTGGAAATAAATGAAGATGAAACAATTCAAAGTGCCGATTATCTTAATTACG 4040 Query 7027 GGAAGGTTCCCAT 7039 | || |||||||| Sbjct 4039 GTAAAGTTCCCAT 4027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35432365334212