Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025342.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq34844 109 4e-20 >seq34844 Length=5462 Score = 109 bits (120), Expect = 4e-20 Identities = 249/375 (66%), Gaps = 0/375 (0%) Strand=Plus/Minus Query 6471 TGCATCGCCAATCACATTGACTATGAAAAATGGAACAATCATCAAAGAAAGGACGCCACC 6530 || || || || ||| | || ||| || ||||| ||| |||| || || || || | | Sbjct 4574 TGTATAGCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAAC 4515 Query 6531 GGCCCTGTCTTTAAGGTCATGGGACAGTTCTTGGGATTACCAAATTTAATCTATCGAACA 6590 ||| || || || ||||||||||| || ||||| ||| ||||| | |||| Sbjct 4514 AACCCAGTTTTCAAAGTCATGGGACAATTTATGGGAGCACCCAATTTGTTTACGAGAACT 4455 Query 6591 CATGAGTTCTTTGAACAGAGCTGGATTTATTATAATGGTAGGCCTGATTTGATGGCAGTT 6650 |||||| | || ||| | || | ||||||||| || |||| |||||| ||| |||| Sbjct 4454 CATGAGATTTTCGAAAATAGTTTAATTTATTATCCTGCTAGGGGTGATTTAATGACAGTA 4395 Query 6651 GTTGATGGGCGACTGATCAACTCTGGAACCAATATAGTCTGTTGGGACGGTCAAGCTGGA 6710 | | | | | |||| | | | ||| || ||| | ||||| |||| Sbjct 4394 CGTAACAATCAAGTTGTCAATAATTCAGACCTGCGAGTTTGCTGGCAGGGTCAGAGTGGA 4335 Query 6711 GGGTTAGAAGGATTGAGACAGAAGGGTTGGACGGTTGTAGGACTCTTGATGATCATAAGA 6770 || | |||||| | ||||| ||||||||| | | ||||| | | |||| ||| Sbjct 4334 GGAATGGAAGGACTAAGACAAAAGGGTTGGTCAATCGTAGGGTTACTTTCCATCAACAGA 4275 Query 6771 GAAGCTAGAGTTCGTAACACAGCTGTCAAAATTTTGGCTCAGGGAGACAACCAAGTGATC 6830 ||| | || |||||| || ||| | || |||||||||||||||||||| || Sbjct 4274 GAAATATTACAACGAAACACATTAGTAAAAGTATTAGCTCAGGGAGACAACCAAGTAATA 4215 Query 6831 TGCACTCAGTATAAG 6845 ||||| ||||||| Sbjct 4214 TGCACCATGTATAAG 4200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35384479445392