Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025354.1 Length=13169 Score E Sequences producing significant alignments: (Bits) Value seq121975 87.8 2e-13 >seq121975 Length=4353 Score = 87.8 bits (96), Expect = 2e-13 Identities = 228/336 (68%), Gaps = 15/336 (4%) Strand=Plus/Plus Query 8450 AACTCCCTGATAATAGGCCTTAAG-GGGAAGGAAAGAGAGCTAAAAATAATTGGGAGATA 8508 || || ||||||||||| ||||| | || ||| |||| | ||||| ||| ||||| Sbjct 289 AATTCACTGATAATAGG-ATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATA 347 Query 8509 TTTCGCTCTACTCTCATGG--GACTTGCGGGATTATTTTGTTGCAACAGAATATCTGATC 8566 ||||||| || | || ||| |||| | | ||| ||||| || || || ||||| Sbjct 348 TTTCGCTTTAATGTCCTGGGAGACTAGATG--TTACTTTGTCTTAATCGAGTACTTGATC 405 Query 8567 AAAAAGTACATCGT---CCCCTATTTCGGAGGACTTACCATGGCAGACGATCTGTTAGGA 8623 ||| | |||| | || |||||| | ||| | ||||||||||||||| | | Sbjct 406 AAACA--ACATTATGTACCACTATTTAAG-GGATTAACCATGGCAGACGATTTAAATACA 462 Query 8624 GTAATAAAGAAAATGCTCAGCAAC-GCGCAAGGTCAAGGAAGAGATGATTATGAGATGAT 8682 ||| |||||| ||| | | ||| | |||||||| | ||| |||| || || Sbjct 463 TTAACAAAGAAGATGAT-GGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACAT 521 Query 8683 AACAATAGCTGATCACATTGATTATGAAAAATGGAACAACCATCAAAGAGAAGAATCGAA 8742 ||||| |||| | ||||| |||||||| ||| |||| ||| ||||| | || Sbjct 522 TTGTATAGCAAATCATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAA 581 Query 8743 TCGGTCCGTCTTCCAAGTAAT-GGACAAATTCTTGG 8777 | | || ||| |||| || |||||| ||||||| Sbjct 582 TAATCCTGTATTCAAAGTGATGGGACAATTTCTTGG 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41919724450772