Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025356.1 Length=11097 Score E Sequences producing significant alignments: (Bits) Value seq121975 154 1e-33 >seq121975 Length=4353 Score = 154 bits (170), Expect = 1e-33 Identities = 256/365 (70%), Gaps = 6/365 (2%) Strand=Plus/Plus Query 6298 CTCATAATAGGACTAAAAGGGAAAGAAAGAGAATTGAAAATCGCCGGAAGATTCTTTTCC 6357 || ||||||||| ||| || |||||| ||||| ||||||| || || |||| || | Sbjct 295 CTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCT 354 Query 6358 CTGATGTCCTGGCA-ACTGAGAGAATATTTTGTCATCACCGAGTACTTAATAAAGACTCA 6416 | ||||||||| | ||| ||| || |||||| | | ||||||||| || || || Sbjct 355 TTAATGTCCTGGGAGACT-AGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACA 413 Query 6417 TTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACATCAGTTGTAAAGAA 6476 |||||||||| |||| || ||| | || ||||| || ||| | | || | |||||| Sbjct 414 TTATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAA 473 Query 6477 GATGTTGGACAACACGAATGGACAAGGACTGGATGATTATTCATCGATTTGCATCGCCAA 6536 |||| |||| | | | || ||||| | || |||| | ||||| || || || Sbjct 474 GATGATGGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAA 533 Query 6537 TCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAATCCAATGGGCCTGTGTT 6596 ||| | || || ||| |||||||| |||||||||||||| ||||| ||||| || Sbjct 534 TCATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATT 593 Query 6597 TCGAGTCATGGGGCAGTTTTTGGGTTATCCCAGA--TTGTTTGAAAGAACCCATGAGTTT 6654 ||| ||||| || ||| | ||| || ||| || ||| |||||| ||||| | Sbjct 594 CAAAGTGATGGGACAATTTCTTGGT--GCCGAGAATTTATTTACAAGAACGCATGAAATC 651 Query 6655 TTTGA 6659 ||||| Sbjct 652 TTTGA 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35311054415868