Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025358.1 Length=15024 Score E Sequences producing significant alignments: (Bits) Value seq121975 165 8e-37 seq34844 123 2e-24 >seq121975 Length=4353 Score = 165 bits (182), Expect = 8e-37 Identities = 454/686 (66%), Gaps = 26/686 (4%) Strand=Plus/Plus Query 9870 TGGCCTACCCAACAAATTATAGATGAATTTGGGGATCACTGGCATGAATTACCACTGACA 9929 |||||||| ||| || ||||| || | || ||| ||||||| | |||| || || Sbjct 29 TGGCCTACTCAAAAAGAAATAGAAGATATGGGAGATGTCTGGCATCTACTACCTCTAACT 88 Query 9930 CAATGTTATGAGATACCAGATATGATAGACATCAGTCAGA--TTTATTCAGATAAGAGTC 9987 ||||||| ||||| |||||| |||| ||| | | | || ||| ||| || || |||| Sbjct 89 CAATGTTTCGAGATTCCAGATGTGATTGAC--CCGGCTGACCTTTTTTCGGACAAAAGTC 146 Query 9988 ACTCATTGGA--TAGGTCTGAGGTTTTAAAGATTATCAAGGAACAAAAACATAAAAGGAT 10045 | || |||| ||| | | | | | | | ||| || | |||| Sbjct 147 ATTCTATGGACCTAGATAACACATGCGCAGCA--AGCCAGGCACCAGAACA--------- 195 Query 10046 CCCTACTAAAAGGGTACTACAGACATTACTTGAAAAGCCAGCTACGAATTGGCCTGAATT 10105 || || |||| |||| || |||||||| | || || | || | ||||| || || Sbjct 196 -CCAACAAAAAAGGTATTAACAACATTACTAGGAACCCCTGATATAATATGGCCAGACTT 254 Query 10106 TCTTAAAGCAATTAATGATCACGGACTAGATTGGGAAAAATTGGTGATTGGGTTGAAAGC 10165 | | || |||||||||| ||| |||| | | | | || | || || || | ||| Sbjct 255 TGTGAAGAAAATTAATGATGTTGGATTAGACTTGAATTCACTGATAATAGGATTAAGAGC 314 Query 10166 TAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCTTTAATGTCTTACGAATTGAG 10225 || ||||||||| | ||| | ||||||| || |||||||||| | || || Sbjct 315 AAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATGTCCTGGGAGACTAG 374 Query 10226 GGATTATTTTGTATCTACTGAATACCTGATCAAGAAATATTTTGTACCCTTATTTGAAGG 10285 ||| ||||| | | || ||| ||||||| || ||| |||||| ||||| | || Sbjct 375 ATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTACCACTATTTAAGGG 434 Query 10286 TCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAGATGTTGGATGTCTCAAGCGG 10345 |||| ||||| || ||||| |||||| ||| ||||||||| |||| || | || Sbjct 435 ATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGGAAACTTCTATGGG 494 Query 10346 CCAGGGAACCAGAGAAT-ATGATTATATAACTATTGCAAACAACATCGATTATGAAAAAT 10404 || || | ||| ||| | || || || ||| ||||| | | ||||| |||| Sbjct 495 TCAAGGTAT-AGACAATTACGACTACATTTGTATAGCAAATCATTTAGATTACTCGAAAT 553 Query 10405 GGAATAATTATCAAAGGATAGAGTCTAACGGTCCAGTATTTACTGTCATGGGAAAATTT- 10463 ||||||| |||| || | ||| | || ||| ||||| | || |||||| ||||| Sbjct 554 GGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGATGGGACAATTTC 613 Query 10464 TTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTTCCAAAAAAGCTTGATTTAT 10523 |||| || ||| | ||||||||||| |||||| |||| | | || || || || Sbjct 614 TTGGTGC-CGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGAGTTTAATCTAC 672 Query 10524 TATAACCA--AAGGCCTGATTTAATG 10547 ||| ||| ||| |||||||||| Sbjct 673 TAT--CCAGCAAGAGGTGATTTAATG 696 >seq34844 Length=5462 Score = 123 bits (136), Expect = 2e-24 Identities = 369/565 (65%), Gaps = 17/565 (3%) Strand=Plus/Minus Query 10376 TATTGCAAACAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGG 10435 ||| || ||| || | |||||| || ||||||||| |||| |||| ||| | ||| Sbjct 4572 TATAGCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAACAA 4513 Query 10436 TCCAGTATTTACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCA 10495 ||||| || | ||||||||| ||||| |||| ||| ||| | ||||| |||||||| Sbjct 4512 CCCAGTTTTCAAAGTCATGGGACAATTTATGGGAGCACCCAATTTGTTTACGAGAACTCA 4453 Query 10496 TGAATTCTTCCAAAAAAGCTTGATTTATTATAACCAAAGGCCTGATTTAATGATGGTGAG 10555 ||| | ||| |||| || || ||||||||| ||| ||||||||||| || | Sbjct 4452 TGAGATTTTCGAAAATAGTTTAATTTATTATCCTGCTAGGGGTGATTTAATGACAGTACG 4393 Query 10556 AGGTAATGAATGTCTCAACAAATCTGGAGTAAAAGTATGTTGGGAGGGCCAAAAAGGGGG 10615 ||| || | |||| || || | | ||| || ||| |||| || | || || Sbjct 4392 TAACAATCAAGTTGTCAATAATTCAGACCTGCGAGTTTGCTGGCAGGGTCAGAGTGGAGG 4333 Query 10616 TTTGGAGGGACTAAGACAAAAAGGATGGAGTATTTTA-AATTATTTGATGATTGAAAGAG 10674 |||| |||||||||||||| || ||| || || ||| || | | | Sbjct 4332 AATGGAAGGACTAAGACAAAAGGGTTGGTCAATCGTAGGGTTACTT-----TCCATCAAC 4278 Query 10675 AGAGCAGGATT----CGAAATACAAAGGTCAAAATATTGGCACAGGGGGATAATCAAACA 10730 |||| | ||| ||||| ||| || ||| |||| || ||||| || || ||| | Sbjct 4277 AGAGAAATATTACAACGAAACACATTAGTAAAAGTATTAGCTCAGGGAGACAACCAAGTA 4218 Query 10731 ATTAGTATGTGTTATAAGACAGAA---AGTTGGCAGAATGAAGAGGAATTGGAAAGTCAT 10787 || | | ||||||| | || || | || ||| | || ||| | Sbjct 4217 ATATGCACCATGTATAAGATACAATCCTATTCTGATGATAGCGAGTTAATGAAAA---AC 4161 Query 10788 ATTGAAAACATGGTTAGCAACAATAACCAAATAATGAGTGCAATAATTCAAGGTACAGAA 10847 || ||||| || | | || ||| | || |||| || || ||| ||||| Sbjct 4160 ATCGAAAATATAATAAAAAATAATGAAGCTATCATGAAAGCTATTGAAAGAGGAGCAGAA 4101 Query 10848 AAATTGGGATTGAAAATAAATTTAGATGAGACTATGACAAGTGCTGATTACATTAATTAT 10907 ||| | || ||| |||||||| |||||| || || |||||| ||||| ||||||| Sbjct 4100 AAACTTGGGTTGGAAATAAATGAAGATGAAACAATTCAAAGTGCCGATTATCTTAATTAC 4041 Query 10908 GGGAAAGTACCTATAATAGAGGGGA 10932 || ||||| || ||||| |||||| Sbjct 4040 GGTAAAGTTCCCATAAT-TAGGGGA 4017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47841220708477