Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025362.1 Length=12240 Score E Sequences producing significant alignments: (Bits) Value seq121975 122 7e-24 >seq121975 Length=4353 Score = 122 bits (134), Expect = 7e-24 Identities = 273/404 (68%), Gaps = 6/404 (1%) Strand=Plus/Plus Query 7429 ATGCATTGATTATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttt 7488 || || |||| || || || | |||||||||| ||||||||||| | || |||| || Sbjct 290 ATTCACTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATT 349 Query 7489 tttCACTTATGTCTTGGGA-ACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAG 7547 | | | ||||| ||||| ||| || || ||||| | | || |||||||| || Sbjct 350 TCGCTTTAATGTCCTGGGAGACT-AGATGTTACTTTGTCTTAATCGAGTACTTGATCAAA 408 Query 7548 AAGCATTTTGTACCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACT 7607 | |||| ||||||| | ||||| || || || ||||| || | || | || |||| Sbjct 409 CAACATTATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACA 468 Query 7608 AAGAAAATGTTGGAGTCATCAATGGGACAGGGGAATCCTGATTATGA-GAC-TGTGTCCA 7665 ||||| ||| |||| | || ||||| || || | |||| || || | ||| | Sbjct 469 AAGAAGATGATGGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGT--A 526 Query 7666 TTGCTAACCATGTCGATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGG 7725 | || || ||| | ||||| ||| ||||| ||| | || |||| | | ||| | Sbjct 527 TAGCAAATCATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATC 586 Query 7726 CAGTCTTTAGAGTCATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATG 7785 | || || | ||| |||||||||||| | ||| | ||||| | | | || |||| Sbjct 587 CTGTATTCAAAGTGATGGGACAATTTCTTGGTGCCGAGAATTTATTTACAAGAACGCATG 646 Query 7786 AATTTTTTGAGAAAAGCTGGATCTATTATGCTGGAAGATGTGAT 7829 || | ||||||| || | ||||| ||| | | |||| ||||| Sbjct 647 AAATCTTTGAGAGGAGTTTAATCTACTATCCAGCAAGAGGTGAT 690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38959959143952