Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025371.1 Length=11082 Score E Sequences producing significant alignments: (Bits) Value seq121975 114 9e-22 >seq121975 Length=4353 Score = 114 bits (126), Expect = 9e-22 Identities = 220/323 (68%), Gaps = 1/323 (0%) Strand=Plus/Plus Query 6287 CTCATCATAGGATTGAAGGGAAAAGAGAGAGAGTTAAAGATCGCCGGAAGGTTCTTTTCA 6346 || || |||||||| | | |||||| |||| | || || || || || | || | Sbjct 295 CTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCT 354 Query 6347 CTGATGTCTTGGCAGTTGAGAGAGTACTTTGTGATAACGGAATATCTGATTAAGACCCAT 6406 | ||||| ||| || ||| |||||||| ||| || || |||| || ||| Sbjct 355 TTAATGTCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACAT 414 Query 6407 TATGTTCCACTATTTAAAGGATTGACTATGGCAGATGACCTCACATCAGTCGTGAAGAAG 6466 ||||| ||||||||||| ||||| || |||||||| || | | || | |||||| Sbjct 415 TATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAG 474 Query 6467 ATGTTGGACAACACAAACGGACAAGGATTAGACGACTATTCATCGATTTGTATAGCGAAT 6526 ||| |||| | | | || ||||| ||||| | || | ||||||||||| ||| Sbjct 475 ATGATGGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAAT 534 Query 6527 CACATTGATTACGAAAAATGGAACAATCATCAGAGGAAAGAGTCAAATGGACCGGTCTTT 6586 || | |||||| |||||||| || ||||||| ||||| | ||| || || || Sbjct 535 CATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTC 594 Query 6587 CGCGTCATGGGACAATTT-TTgg 6608 || |||||||||||| |||| Sbjct 595 AAAGTGATGGGACAATTTCTTGG 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35263168527048