Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025378.1 Length=11202 Score E Sequences producing significant alignments: (Bits) Value seq121975 96.9 2e-16 >seq121975 Length=4353 Score = 96.9 bits (106), Expect = 2e-16 Identities = 199/290 (69%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 6416 TACTTCGTCATAACCGAGCACCTAATTAAGACTCACTTTGTCCCTCTGTTCCACGGACTT 6475 ||||| ||| ||| |||| || | || || || | ||| || || || | ||| | Sbjct 379 TACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTACCACTATTTAAGGGATTA 438 Query 6476 ACGATGGCAGATGATCTCACATCAGTGATCAAGAAGATGATGGACAGTTCCTCGGGGC-A 6534 || |||||||| ||| | | || | | |||||||||||||| | ||| ||| | | Sbjct 439 ACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGGAAACTTCTATGGGTCAA 498 Query 6535 GGGGTTGACAGATTACTCAGCTGTATGCATAGCCAATCATATCGACTACGAAAAATGGAA 6594 || | |||| ||||| | || ||||| |||||| | || ||| |||||||| Sbjct 499 GGTATAGACA-ATTACGACTACATTTGTATAGCAAATCATTTAGATTACTCGAAATGGAA 557 Query 6595 CAATCACCAGCGGAAAGAATCCAATGGGCCGGTATTCCGAGTAATGGGCCAA-TTCTTGG 6653 || | ||| | |||||| ||||| || |||||| ||| ||||| ||| ||||||| Sbjct 558 TAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGATGGGACAATTTCTTGG 617 Query 6654 -GCTTCCCCAATCTGATATCCAGAACGCACGAATTCTTTGAGAAAAGTTT 6702 || | ||| | | | |||||||| ||| ||||||||| ||||| Sbjct 618 TGC--CGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGAGTTT 665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35646255637608