Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025387.1 Length=11492 Score E Sequences producing significant alignments: (Bits) Value seq121975 98.7 7e-17 >seq121975 Length=4353 Score = 98.7 bits (108), Expect = 7e-17 Identities = 256/388 (66%), Gaps = 2/388 (1%) Strand=Plus/Plus Query 8485 GGCATATCTGGGATCAAAGACATCCGAAACCACCAGTTTGCTGCAGCCGTGGGAGCGAGA 8544 ||||||| |||||||||| ||||| ||| || || | ||| ||||| ||| Sbjct 2244 GGCATATTTGGGATCAAAAACATCTGAATTTACGAGCATATATAGGCCTTGGGAAAAAGA 2303 Query 8545 GACAAAGATCCCATTGATCAAAAGGGCTGCAAAATTGAGAACCCCCATCTCCTGGTTTGT 8604 ||| || || | || ||||| |||||||| ||| ||| | || |||||| | Sbjct 2304 GACCTCCATACCCATCATAAAAAGAGCTGCAAATTTGCGAAATGCAATAGGTTGGTTTAT 2363 Query 8605 TCAACCTGATTCTAACTTGGCGGCTTCGATCATGGGAAACTTGGAG-TCGCTTACAGGGG 8663 | || ||||| || | ||||| || | | || | || | ||||| | Sbjct 2364 AAATAAGGAGTCTAAATTAGGAAAATCGATT-TGTCAGAATTTAACATCTTTAACAGGAG 2422 Query 8664 AAAACTGGTCGAATGCCATAGCAGGATTCAAAAGAACGGGTTCTGCGCTTCATCGATTCT 8723 || | || || || ||||| | | ||| |||||| ||||| || || ||| |||||| Sbjct 2423 AAGATTGTTCTAAGTCCATATCCAGTTTCTCAAGAACTGGTTCAGCCCTACATAGATTCT 2482 Query 8724 CCTGCTCCAGAGTGAGCGCGGGGGGTTATTCAGGCCAAAGCCCAGCCAAACTCACACGGA 8783 | || || || ||||| || || ||| ||| ||||| || | ||||| || | | Sbjct 2483 CATGTTCTCGACAAAGCGCAGGAGGATATGCAGCTCAAAGTCCTGTAAAACTAACGAGAA 2542 Query 8784 TGGTCTCTACCACCGACACATTTATGGCTCCCACAGATGACAATTATGATTTCATGTTTC 8843 || | ||||||||||| || || | | ||| | |||||||| |||||||| | Sbjct 2543 TGATTTCTACCACCGATACTTTAGAAGAATTGAATGATAAAAATTATGACTTCATGTTCC 2602 Query 8844 AGTCCTTGCTGATCCACTCGCAAATCAC 8871 || | ||||| ||| | || ||||| || Sbjct 2603 AGACTTTGCTAATCTAATCTCAAATTAC 2630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36572049488128