Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025394.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq121975 109 4e-20 >seq121975 Length=4353 Score = 109 bits (120), Expect = 4e-20 Identities = 259/384 (67%), Gaps = 8/384 (2%) Strand=Plus/Plus Query 6258 CTGGTAATTGGACTCAAAGGGAAGGAAAGGGAGTTGAAGATCGCAGGTCGATTCTTTTCG 6317 ||| |||| ||| | | || || ||| | || |||| || || ||| ||| || | Sbjct 295 CTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCT 354 Query 6318 TTAATGTCTTGG-AGATTACGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACACA 6376 |||||||| ||| ||| || | |||||||| | | ||||| ||||| ||| ||| Sbjct 355 TTAATGTCCTGGGAGACTAGATGT-TACTTTGTCTTAATCGAGTACTTGATCAAACAACA 413 Query 6377 CTTTGTTCCGTTATTTCATGGATTGACTATGGCAGATGATATGACGGCTGTGATCaaaaa 6436 | ||| || ||||| | ||||| || |||||||| ||| | | | | | || || Sbjct 414 TTATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAA 473 Query 6437 aaTGATGGAGAGTTCATCAGGTCAGGGTCTCAACGATTATTCTTCAATATGTCTGGCTAA 6496 |||||||| | ||| ||||| ||| | || |||| | || ||| | || || Sbjct 474 GATGATGGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAA 533 Query 6497 TCACATTGATTATGAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCTGTTTT 6556 ||| | ||||| ||||||||| || ||||||||||||| | ||| ||||| || Sbjct 534 TCATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATT 593 Query 6557 CCGTGTCATGGGTC-AGTTCTTGGGATTTCCTA-ACCTTATAT-CCAGGACTCATGAATT 6613 | || ||||| | | ||||||| | || | | |||| | | || || |||||| | Sbjct 594 CAAAGTGATGGGACAATTTCTTGG---TGCCGAGAATTTATTTACAAGAACGCATGAAAT 650 Query 6614 CTTTGAAAAAAGTCTGATATATTA 6637 |||||| | ||| | || || || Sbjct 651 CTTTGAGAGGAGTTTAATCTACTA 674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35330208771396