Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025400.1 Length=15444 Score E Sequences producing significant alignments: (Bits) Value seq121975 161 1e-35 seq34844 84.2 2e-12 >seq121975 Length=4353 Score = 161 bits (178), Expect = 1e-35 Identities = 310/455 (68%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 10529 TGGCCAGAATTTTTACAAAGGGTGAATGATCATGGATTAGATTGGGAGAAGTTGGTGATA 10588 |||||||| ||| | | | | |||||| ||||||||| | | | || | ||| Sbjct 244 TGGCCAGACTTTGTGAAGAAAATTAATGATGTTGGATTAGACTTGAATTCACTGATAATA 303 Query 10589 GGTTTAAAAGCCAAAGAAAGGGAGCTTAAAGAAGAAGGCAGGTTTTTCTCTTTAATGAGT 10648 || |||| ||| |||||| | || | ||| | || || | |||| |||||||| Sbjct 304 GGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATGTCC 363 Query 10649 TATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAATATTATGTACCA 10708 | ||| ||| |||||||| || || |||||||||||| || ||||||||||| Sbjct 364 TGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTACCA 423 Query 10709 TTATTCGAAGGACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAGATGCTGGAT 10768 |||| | ||| | || ||||| || ||||| |||||| | | || |||||| |||| Sbjct 424 CTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGGAA 483 Query 10769 GTGTCCTCCGGCCAAGGAACAAGAAACTATGATTATGTGTCAATAGCTAACAATATTGAT 10828 || || ||||| | | || || || || | | ||||| || || | ||| Sbjct 484 ACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAATCATTTAGAT 543 Query 10829 TATGAAAAATGGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTATTCAGAGTAATG 10888 || ||||||||||| |||| ||||||||| | ||| || ||||||| ||| ||| Sbjct 544 TACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGATG 603 Query 10889 GGGCAATTCCTTGGAATGGAAAATTTGATAGTTCGGACACATGAATTCTTTGAAAATAGT 10948 || ||||| ||||| || ||||| | | || |||||| ||||||| | ||| Sbjct 604 GGACAATTTCTTGGTGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGAGT 663 Query 10949 TTGGTTTATTATAACCAGC--GAGCAGATTTAATG 10981 || | || ||| ||||| ||| ||||||||| Sbjct 664 TTAATCTACTAT--CCAGCAAGAGGTGATTTAATG 696 >seq34844 Length=5462 Score = 84.2 bits (92), Expect = 2e-12 Identities = 185/274 (68%), Gaps = 14/274 (5%) Strand=Plus/Minus Query 10811 ATAGCTAACAATATTGATTATGAAAAATGGAATAATTATCAAAGAAAAGAATCAAATGGA 10870 ||||||||| | | |||||| || ||||||||| |||| || |||||| |||| Sbjct 4571 ATAGCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAACAAC 4512 Query 10871 CCAGTATTCAGAGTAATGGGGCAATTCCTTGGAATGGAAAATTTGATAGTTCGGACACAT 10930 ||||| |||| ||| ||||| ||||| | ||| |||||| | | || ||| Sbjct 4511 CCAGTTTTCAAAGTCATGGGACAATTTATGGGAGCACCCAATTTGTTTACGAGAACTCAT 4452 Query 10931 GAATTCTTTGAAAATAGTTTGGTTTATTATAACCAGC--GAGCAGATTTAATGATGGTAC 10988 || | || ||||||||||| |||||||| || || | | |||||||||| |||| Sbjct 4451 GAGATTTTCGAAAATAGTTTAATTTATTAT--CCTGCTAGGGGTGATTTAATGACAGTAC 4394 Query 10989 --AAGGAAGAAATTGT---TTAAACAGAACAGGAACCAAGGTGTGTTGGGAGGGTCAAAA 11043 || | || |||| | | |||| | | | || || ||| ||||||| | Sbjct 4393 GTAACAATCAAGTTGTCAATAATTCAGACCTGCGA-----GTTTGCTGGCAGGGTCAGAG 4339 Query 11044 AGGGGGATTAGAGGGGCTGAGGCAAAAGGGATGG 11077 || ||| | || || || || |||||||| ||| Sbjct 4338 TGGAGGAATGGAAGGACTAAGACAAAAGGGTTGG 4305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49181936842297