Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025401.1 Length=11056 Score E Sequences producing significant alignments: (Bits) Value seq121975 105 5e-19 >seq121975 Length=4353 Score = 105 bits (116), Expect = 5e-19 Identities = 220/322 (68%), Gaps = 12/322 (4%) Strand=Plus/Plus Query 6265 TGATCATTGGATTAAAACCTAAAGAGAGAGAGCTGAAAATTGACGGTCGGTATTTTGCAT 6324 |||| || ||||||| | | ||||| |||| ||||||||| ||| | ||||| || | Sbjct 296 TGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTT 355 Query 6325 TGTTAAGTTGGAAGTTACGAGAG--TATTTTGTTATCACAGAGTATTTGATAAAAACACA 6382 | | ||| || || ||| || ||||| | | ||||| ||||| ||| ||| Sbjct 356 TAATGTCCTGGGAG--ACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACA 413 Query 6383 TTTTGTCAAATTGTATGATGGCTTGACCATGGCAGATGATCTTAAAGACGTGGTTGGAAA 6442 || ||| | | | | | || || ||||||||||| ||| ||||| || | | ||| Sbjct 414 TTATGTACCACTATTTAAGGGATTAACCATGGCAGACGAT-TTAAATACAT--TAACAAA 470 Query 6443 ACTGTTGAGTCGA----TCAATGGGTCAGGGGACACCTGATTACACCTCTATAACTTTTG 6498 | ||| | || || |||||||| || | | ||||| || || | | | Sbjct 471 GAAGATGA-TGGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAG 529 Query 6499 CTAATCATATAGATTACAGCAAATGGAACAACCATCAAAGAAAAGAATCAAATGGCCCTT 6558 | |||||| |||||||| |||||||| ||| |||| ||||||||| | ||| ||| Sbjct 530 CAAATCATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTG 589 Query 6559 TATTCCGCGTGATGGGACAATT 6580 ||||| |||||||||||||| Sbjct 590 TATTCAAAGTGATGGGACAATT 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35180166319760