Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_028246.1 Length=14627 Score E Sequences producing significant alignments: (Bits) Value seq121975 168 6e-38 seq34844 165 8e-37 >seq121975 Length=4353 Score = 168 bits (186), Expect = 6e-38 Identities = 348/514 (68%), Gaps = 8/514 (2%) Strand=Plus/Plus Query 9702 TGGCCTGAATTTTTAAAAGAAATTAATGATCACGGTTTGGAGTGGGAAAAACTGGTAATA 9761 ||||| || ||| | || ||||||||||| || || || | | | |||| ||||| Sbjct 244 TGGCCAGACTTTGTGAAGAAAATTAATGATGTTGGATTAGACTTGAATTCACTGATAATA 303 Query 9762 GGACTAAAAGCTAAAGAGAGAGAATTAAAGATAGAAGGTAGAtttttttCATTGATGTCA 9821 ||| ||| ||| ||||| ||||| | || || | ||||||| ||| | || ||||| Sbjct 304 GGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATGTCC 363 Query 9822 TATGACATGAGGGATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCA 9881 | || | || |||||| || | | || || ||||| ||| || ||||||||||| Sbjct 364 TGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTACCA 423 Query 9882 TTATTCAAAGGATTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAA 9941 |||| || ||||| |||||||| || ||| ||||||| || |||||| ||| | || Sbjct 424 CTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGGAA 483 Query 9942 GTTTCTAAAGGTCAAGGGCTA-ACAGATTATAAAGAGATAACATTTGCTAATCACTTGGA 10000 ||||| |||||||| || ||| |||| | | || | || ||||| || || Sbjct 484 ACTTCTATGGGTCAAGGTATAGACA-ATTACGACTACATTTGTATAGCAAATCATTTAGA 542 Query 10001 TTATGAGAAGTGGAATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTCAGAGTAAT 10060 ||| ||| |||||||| |||| || | ||| | || ||| || |||| ||| || Sbjct 543 TTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGAT 602 Query 10061 GGGCCAGTTTTTAGGTCTACCTCACTTAATAGAAAGAACTCACGAGTTCTTTGAAAATAG 10120 ||| || ||| | ||| | ||| | |||||| || || ||||||| | || Sbjct 603 GGGACAATTTCTTGGTGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGAG 662 Query 10121 TCTAATTTATTACAATGGCCGACCTGATTTAATGTATGTCAG---AAATAAAGTTGTACA 10177 | |||| || || | || ||||||||||| ||| | | ||||||||| | Sbjct 663 TTTAATCTACTATCCAGCAAGAGGTGATTTAATGTCTGTGCGTGAAGCCAAAGTTGTAAA 722 Query 10178 CTCCAAAGGTGATGACATCGTTTGCTGGGAAGGA 10211 ||| |||| | || || |||||||| ||| Sbjct 723 ---CAACAGTGAACATATTGTATGCTGGGATGGA 753 >seq34844 Length=5462 Score = 165 bits (182), Expect = 8e-37 Identities = 420/629 (67%), Gaps = 24/629 (4%) Strand=Plus/Minus Query 9987 GCTAATCACTTGGATTATGAGAAGTGGAATAATTATCAAAGGAGGGAATCAAACGGTCCG 10046 ||||| |||||||||||| |||||||||||| |||| |||| ||| ||||| || Sbjct 4568 GCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAACAACCCA 4509 Query 10047 GTGTTCAGAGTAATGGGCCAGTTTTTAGGTCTACCTCACTTAATAGAAAGAACTCACGAG 10106 || |||| ||| ||||| || ||| | || ||| | || | |||||||| ||| Sbjct 4508 GTTTTCAAAGTCATGGGACAATTTATGGGAGCACCCAATTTGTTTACGAGAACTCATGAG 4449 Query 10107 TTCTTTGAAAATAGTCTAATTTATTACAATGGCCGACCTGATTTAAT----GTATGTCAG 10162 | || ||||||||| |||||||||| || | ||||||||| ||| || | Sbjct 4448 ATTTTCGAAAATAGTTTAATTTATTATCCTGCTAGGGGTGATTTAATGACAGTACGT-AA 4390 Query 10163 AAATAAAGTTGT--ACACTCCAAAGGTGATGACATCGTTTGCTGGGAAGGACAAAAAGGA 10220 ||| ||||||| | | | || | || || ||||||||| | || || | ||| Sbjct 4389 CAATCAAGTTGTCAATAATTCAGACCTG-CGA----GTTTGCTGGCAGGGTCAGAGTGGA 4335 Query 10221 GGATTAGAGGGTCTAAGACAAAAAGGATGGAGTGTCCTTAATTGCCTAATGATTGAGAGA 10280 ||| | || || ||||||||||| || ||| || | | || || | ||| Sbjct 4334 GGAATGGAAGGACTAAGACAAAAGGGTTGGTCAATCGTAGGGTTACTTTCCATCAACAGA 4275 Query 10281 GAATCAAAGATT----CGGAACACCCAAATCGGCTTATTGGCCCAGGGAGACAACCAAGT 10336 | ||| ||| || ||||| | | |||| || ||||||||||||||||| Sbjct 4274 G----AAATATTACAACGAAACACATTAGTAAAAGTATTAGCTCAGGGAGACAACCAAGT 4219 Query 10337 AATCACAACACAT-TATAAAGTTGAGCCATATCAAAATGACAATGAATTAATCTTCCACA 10395 ||| || ||| ||||| | | | ||| |||| | || ||||| ||| Sbjct 4218 AATATGCAC-CATGTATAAGATACAATCCTATTCTGATGATAGCGAGTTAATGAAAAACA 4160 Query 10396 TCAATAATATTATATCGAATAATAATCGTATAATGGATGCAATAATAGAAGGAACAGAAA 10455 || | ||||| ||| |||||| | ||| ||| | || || | |||| |||||| Sbjct 4159 TCGAAAATATAATAAAAAATAATGAAGCTATCATGAAAGCTATTGAAAGAGGAGCAGAAA 4100 Query 10456 AGTTGGGCTTAAAAATAAACATGGATGAGACAATTCAGAGTGCAGATTATATTAACTATG 10515 | | || || ||||||| ||||| |||||||| ||||| |||||| |||| || | Sbjct 4099 AACTTGGGTTGGAAATAAATGAAGATGAAACAATTCAAAGTGCCGATTATCTTAATTACG 4040 Query 10516 GGAAAGTTCCGATATATAGAGGGAATATTC-TGGGTTTAAATCAGAAGCGGTGGTCAAGA 10574 | |||||||| ||| ||| || || |||| || | | ||||| ||| | ||||| || Sbjct 4039 GTAAAGTTCCCATAATTAGGGGAAACATTCATGTATCTGAATCA-AAGAGATGGTCTCGA 3981 Query 10575 GTAAATTATGTGAGTAATGATCAGTTGCC 10603 || | || |||||| |||||||| Sbjct 3980 CTAGCTACATTGTCTAATGACCAGTTGCC 3952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46573924743890