Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_028255.1 Length=11003 Score E Sequences producing significant alignments: (Bits) Value seq121975 159 2e-35 >seq121975 Length=4353 Score = 159 bits (176), Expect = 2e-35 Identities = 258/366 (70%), Gaps = 4/366 (1%) Strand=Plus/Plus Query 6179 AGGAAAAGAGAGAGAATTGAAACTAGCCGGAAGATTCTTTTCCTTGATGTCTTGGAA-AT 6237 || |||||| ||||| ||||| | || || |||| || | || ||||| ||| | | Sbjct 312 AGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATGTCCTGGGAGAC 371 Query 6238 TACGTGAATATTTTGTAATCACGGAATATCTTATCAAAACACACTTTGTCCCCATGTTCA 6297 || || || ||||| | | || || | |||||| ||| | ||| || | || | Sbjct 372 TAGATGT-TACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTACCACTATTTA 430 Query 6298 AGGGACTAACCATGGCAGATGATCTAACTGCTGTCATCaaaaaaaTGTTGGATACATCCT 6357 ||||| ||||||||||||| ||| ||| | | | | || || ||| |||| || || Sbjct 431 AGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGGAAACTTCTA 490 Query 6358 CAGGTCAAGGATTGGACAATTACGAGTCCATTTGTATCGCGAATCACATTGATTATGAGA 6417 |||||||| | ||||||||||| | ||||||||| || ||||| | ||||| || Sbjct 491 TGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAATCATTTAGATTACTCGA 550 Query 6418 AATGGAACAACCATCAACGCAAGGAATCCAATGGGCCTGTATTTCGTGTGATGGGACAGT 6477 ||||||| ||| |||| | || ||| ||||| |||||||| ||||||||||| | Sbjct 551 AATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGATGGGACAAT 610 Query 6478 TCCTAGGATACCCAAACCTGATTGA-GAGGACACACGAATTCTTCGAGAAGAGCTTGATC 6536 | || || | || | | | ||| | || || || ||| |||| |||| ||| || ||| Sbjct 611 TTCTTGG-TGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGAGTTTAATC 669 Query 6537 TACTAT 6542 |||||| Sbjct 670 TACTAT 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35010969512596