Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031236.1 Length=11165 Score E Sequences producing significant alignments: (Bits) Value seq34844 113 3e-21 >seq34844 Length=5462 Score = 113 bits (124), Expect = 3e-21 Identities = 410/635 (65%), Gaps = 10/635 (2%) Strand=Plus/Minus Query 6472 GCTAACCATTTGGATTATGAGAAGTGGAACAATTATCAAAGGATTGAGTCCAACGGACCG 6531 |||||||| ||||||||| |||||||| ||| |||| |||| || | ||| || Sbjct 4568 GCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAACAACCCA 4509 Query 6532 GTCTTCAAAGTCATGGGACAGTTTCTGGG-GTATCCAAATCTTATATATCGAACACATGA 6590 || ||||||||||||||||| ||| |||| | | |||| | | || |||| ||||| Sbjct 4508 GTTTTCAAAGTCATGGGACAATTTATGGGAGCACCCAATTTGTTTA-CGAGAACTCATGA 4450 Query 6591 GTTCTTCCAGAAAAGCATCATTTACTACAATGATAGGCCGGATTTGATGGTAGTAGAGAA 6650 | | ||| | || || | ||||| || || |||| ||||| ||| |||| || Sbjct 4449 GATTTTCGAAAATAGTTTAATTTATTATCCTGCTAGGGGTGATTTAATGACAGTACGTAA 4390 Query 6651 CGGGATGA--TAGTGAATCGCACTGAAGAGAGAGTAGTGTGGAACGGACAAGCTGGGGGA 6708 | || | | || ||| | || | |||| ||| | || || ||| ||| Sbjct 4389 C--AATCAAGTTGTCAATAATTCAGACCTGCGAGTTTGCTGGCAGGGTCAGAGTGGAGGA 4332 Query 6709 TTGGAAGGATTAAGGCAGAAAGGATGGAGTGTTTTGAATG--CATTATCGATTGCCAGAG 6766 |||||||| |||| || || || || || | | | | | | || || ||||| Sbjct 4331 ATGGAAGGACTAAGACAAAAGGGTTG--GTCAATCGTAGGGTTACTTTCCATCAACAGAG 4274 Query 6767 AGGGACGAGATAGAAACACCAAGCTTGCTCTTTTGGCTCAAGGGGACAACCAAATTATCT 6826 | | | | ||||||| | | || ||||| || ||||||||| | || | Sbjct 4273 AAATATTACAACGAAACACATTAGTAAAAGTATTAGCTCAGGGAGACAACCAAGTAATAT 4214 Query 6827 TCACCAACTACAAGATGCAGGATTACAGAGATGAAAGAGAGCTTAAGTGTAATCTGGAAC 6886 ||||| || ||||| || || ||||| || ||| | | | || | ||| Sbjct 4213 GCACCATGTATAAGATACAATCCTATTCTGATGATAGCGAGTTAATGAAAAACATCGAAA 4154 Query 6887 GAATCAGGATCAATAACGATCAGATTATGAAGTCCATAGAAAGTGGAATAATAAAGCTTG 6946 || | | ||||| || || ||||| | || ||||| ||| | ||| |||| Sbjct 4153 ATATAATAAAAAATAATGAAGCTATCATGAAAGCTATTGAAAGAGGAGCAGAAAAACTTG 4094 Query 6947 GACTGAAAATCAATCAAGACGAGACAATGCAATCTGCTGATTTCACCAATTATGGTAAAA 7006 | || |||| ||| |||| || ||||| ||| ||| |||| ||||| |||||| Sbjct 4093 GGTTGGAAATAAATGAAGATGAAACAATTCAAAGTGCCGATTATCTTAATTACGGTAAAG 4034 Query 7007 TACCGATAATCCGAGGAAACATATACCCATTAGAGACAAAAAGATGGTCTAGGGCTGCTT 7066 | || ||||| | |||||||| | || || |||| ||||||||| | ||| Sbjct 4033 TTCCCATAATTAGGGGAAACATTCATGTATCTGAATCAAAGAGATGGTCTCGACTAGCTA 3974 Query 7067 GTGTGACTAATGATCAGTTACCCAGCCTAGGAAAT 7101 || ||||||| ||||| || | ||||| |||| Sbjct 3973 CATTGTCTAATGACCAGTTGCCTACCCTAGCAAAT 3939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35528137111852