Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031268.1 Length=8683 Score E Sequences producing significant alignments: (Bits) Value seq34844 80.6 1e-11 >seq34844 Length=5462 Score = 80.6 bits (88), Expect = 1e-11 Identities = 183/269 (68%), Gaps = 10/269 (4%) Strand=Plus/Minus Query 3897 GCTAATCACTTAGACTATGAGAAATGGAACAATCATCAGAGGAAAAAGTCAACCTTCCCC 3956 ||||| ||||| || ||| || ||||| ||| ||||||||||| | ||| | ||| Sbjct 4568 GCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAACAACCCA 4509 Query 3957 GTCTTCAAGGTTATGGGTCAGTTCCTTGGGATGCCAAACCTATTCGCTCA----AACTCA 4012 || ||||| || ||||| || || ||||| || | || ||| | | | |||||| Sbjct 4508 GTTTTCAAAGTCATGGGACAATT-TATGGGA-GC--ACCCAATTTGTTTACGAGAACTCA 4453 Query 4013 TGATTTCTTCGAACAGAGTTTTGTTTATTATGGTGAACGTCCTGATCTTATGACTGTTC- 4071 ||| | |||||| | ||||| |||||||| || | |||| | ||||| || | Sbjct 4452 TGAGATTTTCGAAAATAGTTTAATTTATTATCCTGCTAGGGGTGATTTAATGACAGTACG 4393 Query 4072 AAGGAGGAAAGATCGTGAACAATACAGAACATATTGTATGTTGGAACGGTCAACTGGGCG 4131 | | ||| | || || ||| |||| | || || ||| | ||||| || | Sbjct 4392 TAACAATCAAG-TTGTCAATAATTCAGACCTGCGAGTTTGCTGGCAGGGTCAGAGTGGAG 4334 Query 4132 GACTTGAAGGACTACGACAAAAGGGATGG 4160 || | ||||||||| |||||||||| ||| Sbjct 4333 GAATGGAAGGACTAAGACAAAAGGGTTGG 4305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27604618708436