Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031278.1 Length=12247 Score E Sequences producing significant alignments: (Bits) Value seq121975 156 3e-34 seq34844 95.1 9e-16 >seq121975 Length=4353 Score = 156 bits (172), Expect = 3e-34 Identities = 312/459 (68%), Gaps = 14/459 (3%) Strand=Plus/Plus Query 9141 ATAATACCAGACGGATTAAAAGATTATTGGAGAGTTAGAGGACCATATGCAGCCTATTTG 9200 ||| | ||| ||||||||| |||| ||| | |||||||||| ||| || |||||| Sbjct 2194 ATAGTCCCATACGGATTAACAGATCTCTGGGAATCCAGAGGACCATTTGCGGCATATTTG 2253 Query 9201 GGATCTTCAACAAATGAATCTACAAGTATTTTGAGACCTTGGGAAAAGGAAACAAACATC 9260 ||||| |||| ||||| ||| || || | || ||||||||||| || || ||| Sbjct 2254 GGATCAAAAACATCTGAATTTACGAGCATATATAGGCCTTGGGAAAAAGAGACCTCCATA 2313 Query 9261 CCCATGCTTACCAGAGCATCAAATCTTAGAAAATCAATTGGATGGTTTGTTCTTCCCGAG 9320 ||||| | | ||||| ||||| | |||| |||| || |||||| | | ||| Sbjct 2314 CCCATCATAAAAAGAGCTGCAAATTTGCGAAATGCAATAGGTTGGTTTATAAATAAGGAG 2373 Query 9321 TCCAATTTGGCAGAATCAATATATCAAAATCTACACGCCTTGACCGGAGAGGACTGGGAC 9380 || || || | | |||| || | ||| ||| || | || || ||||| || | | | Sbjct 2374 TCTAAATTAGGAAAATCGATTTGTCAGAATTTAACATCTTTAACAGGAGAAGA-TTGTTC 2432 Query 9381 AGAG----TATCCGCAAATTTCAAAAGAACGGGTTCAGCTCTCCACCGTTTCCGCTGCTC 9436 || ||||| | |||| |||||| |||||||| || || | ||| || || Sbjct 2433 TAAGTCCATATCC---AGTTTCTCAAGAACTGGTTCAGCCCTACATAGATTCTCATGTTC 2489 Query 9437 GCGTCAAAGTTCAGGCGGATATGCAGCCCAAAGTCCTGTTAAATTAACCAG---GATATC 9493 || ||||| |||| ||||||||||| ||||||||||| ||| |||| || ||| || Sbjct 2490 TCGACAAAGCGCAGGAGGATATGCAGCTCAAAGTCCTGTAAAACTAACGAGAATGATTTC 2549 Query 9494 CACCACCACAAGCACTTTGCAAGATCTCGGAGACCAAAATTATGATTTTATGTTTCAAAC 9553 |||||| ||||| |||| | || |||||||||| || ||||| || || Sbjct 2550 TACCACC---GATACTTTAGAAGAATTGAATGATAAAAATTATGACTTCATGTTCCAGAC 2606 Query 9554 CTGTATTCTTTATGCACAGATGACGGCTGGAGAATTACA 9592 | | | || | || || || |||| |||||||| Sbjct 2607 TTTGCTAATCTAATCTCAAATTACAACTGGGGAATTACA 2645 Score = 141 bits (156), Expect = 7e-30 Identities = 291/431 (68%), Gaps = 4/431 (1%) Strand=Plus/Plus Query 7248 TGGCCAACTTTTCTGAAACAAATCAACGATGAGGGTCTCGATATCAACGCCTTGATAATA 7307 |||||| ||| |||| |||| || |||| || | || | || | |||||||| Sbjct 244 TGGCCAGACTTTGTGAAGAAAATTAATGATGTTGGATTAGACTTGAATTCACTGATAATA 303 Query 7308 GGCTTAAGAGAGAAAGAAAGAGAAATCAAGATCAATGGCCGATTCTTTTCTCTGATGTCC 7367 || ||||||| |||||| ||||||| || || ||| ||| || || | |||||| Sbjct 304 GGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATGTCC 363 Query 7368 TGGGATTTACGAGA--TTATTTTGTTATAACGGAGTATCTGATTAAAACCCATTTTGTTC 7425 ||||| || ||| ||| ||||| ||| ||||| |||| ||| |||| ||| | Sbjct 364 TGGGA--GACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTAC 421 Query 7426 CCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAGTAGTACGCAAGATGATGG 7485 | || ||| | ||| | || ||||| || ||| | | ||| || | |||||||||| Sbjct 422 CACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGG 481 Query 7486 AAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAGGAATTGCCAATCACTTGG 7545 ||| | | || || ||| || |||| || |||| | || || ||||| || | Sbjct 482 AAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAATCATTTAG 541 Query 7546 ATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAGAACCTGTATTCACAGTCA 7605 |||| || |||||||| | || ||| | || | | | |||||||||| ||| | Sbjct 542 ATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGA 601 Query 7606 TGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTCATGAGTTCTTCGAGAAAA 7665 |||| |||| || || ||||||| || | ||||| ||||| |||| |||| | Sbjct 602 TGGGACAATTTCTTGGTGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGA 661 Query 7666 GCTTCATTTAC 7676 | || || ||| Sbjct 662 GTTTAATCTAC 672 >seq34844 Length=5462 Score = 95.1 bits (104), Expect = 9e-16 Identities = 187/273 (68%), Gaps = 9/273 (3%) Strand=Plus/Minus Query 7530 ATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAGAA 7589 || || || |||||||||||| |||||||||||| | || || | || | | | Sbjct 4571 ATAGCTAACCACTTGGATTATTCTAAGTGGAATAATAATCAGAGGAAAGAAGCAAACAAC 4512 Query 7590 CCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTCAT 7649 || || |||| ||||||||| |||| | ||| || ||||| || ||||||||||| Sbjct 4511 CCAGTTTTCAAAGTCATGGGACAATTTATGGGAGCACCCAATTTGTTTACGAGAACTCAT 4452 Query 7650 GAGTTCTTCGAGAAAAGCTTCATTTACCACGGCGGTAGAGCAGACTTAATGAAGATCTCC 7709 ||| | ||||| || || || ||||| | | ||| | || ||||||| | Sbjct 4451 GAGATTTTCGAAAATAGTTTAATTTATTATCCTGCTAGGGGTGATTTAATGACAGTACGT 4392 Query 7710 AACGGCAACATAGTTAACAAGGATCCCAG---TAAGATGGTATGCTGGCAGGGCCAGAAG 7766 || ||| |||| ||| || ||| | || || ||||||||||| |||| Sbjct 4391 AA---CAATCAAGTTGTCAATAAT-TCAGACCTGCGA--GTTTGCTGGCAGGGTCAGAGT 4338 Query 7767 GGCGGATTGGAAGGACTTCGACAAAAGGGGTGG 7799 || ||| |||||||||| |||||||||| ||| Sbjct 4337 GGAGGAATGGAAGGACTAAGACAAAAGGGTTGG 4305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38982305892068