Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031301.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq34844 104 2e-18 >seq34844 Length=5462 Score = 104 bits (114), Expect = 2e-18 Identities = 138/189 (73%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 8321 GGAGAAGATTGGAGTGGGAAAATCAAAGGATTTAAAAGAACAGGATCAGCATTACATAGA 8380 |||||||||||| | | ||| | | ||| ||||| || |||||||||||| | Sbjct 2693 GGAGAAGATTGGTCTAAGTCAATTTCAAGCTTTTCCAGAACCGGGTCAGCATTACATCGC 2634 Query 8381 TTTTCTTGTTCAAGACAGAGCTCAGGTGGTTATGCAGCGTGTTGTCCAACCAATTTAAGC 8440 ||||| ||||| ||||| ||| ||||||| ||||| || ||||| || |||| | Sbjct 2633 TTTTCATGTTCTAGACAAAGCACAGGTGGATATGCTGCTCAAAGTCCAGTAAAATTAACC 2574 Query 8441 TGGATGATTTCAACAACGGACACATTTCGAATAATTGGAAATG---AAAACTTTGATTTC 8497 | ||||| ||||||||||| ||| | || |||| ||||| | || | ||||||| Sbjct 2573 AGAATGATATCAACAACGGATACA-CTAGACGAATT--AAATGAGAAGAATTATGATTTC 2517 Query 8498 ATGTTTCAA 8506 ||||||||| Sbjct 2516 ATGTTTCAA 2508 Score = 80.6 bits (88), Expect = 2e-11 Identities = 116/163 (71%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 7684 AGAGGAAGAA---ACATTGTTGAATTTTCTGATGAGTATTAAACCTTTATTCCCTCGATT 7740 ||| |||||| | ||| |||||||| |||| ||| |||||||| || ||||| Sbjct 3387 AGACGAAGAATACAAATTATTGAATTTCCTGACACATATACGTCCTTTATTTCCCCGATT 3328 Query 7741 TTTAAGTGAATTTAAATCTGCAACATTTATTGGGATTACTGAAAATTTGATTGGATTATT 7800 || || |||| |||| |||||||| | | || || || ||| | | |||||||| Sbjct 3327 CTTGAGCGAATATAAAAATGCAACATATCTCGGAATAACCGAATCCATAGTAGGATTATT 3268 Query 7801 TCAAAATTCTAGAACAATAAGAACAGCATTTTCAAGGAAATTA 7843 ||||||||| | ||||||||| | ||||| | |||||| Sbjct 3267 TCAAAATTCGCGTACAATAAGACTACATTTTTCTAAAAAATTA 3225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35330208771396