Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031302.1 Length=11370 Score E Sequences producing significant alignments: (Bits) Value seq121975 120 2e-23 >seq121975 Length=4353 Score = 120 bits (132), Expect = 2e-23 Identities = 276/406 (68%), Gaps = 10/406 (2%) Strand=Plus/Plus Query 6420 CTTATTATAGGGTTAAAAGAAAAGGAGCGCGAACTGAAAATTGGAGGCAGATTCTTTGCC 6479 || || ||||| |||| || ||| || || ||| ||||||||| || |||| || || Sbjct 295 CTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCT 354 Query 6480 TTGATGTCCTGGGAAATAAGGGATTATTTTGTAATGACTGAGTACTTGATTAAAACACAC 6539 || ||||||||||| | || ||| ||||| | | ||||||||||| ||| ||| Sbjct 355 TTAATGTCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACAT 414 Query 6540 TTTGTTCCTCTATTTGATGGACTCACAATGGCAGATGACTTAACAACGGTAATCGGGAAA 6599 | ||| || |||||| | ||| | || |||||||| || |||| || ||| ||| Sbjct 415 TATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAG 474 Query 6600 ATTCTTCGAAAC-ACGGAAGGACAAGG-AGATACATCCTATGA--AAATGTGACTTTTGC 6655 | | | ||||| | || ||||| | | ||| || || | || || | | || Sbjct 475 A-TGATGGAAACTTCTATGGGTCAAGGTATAGACA-ATTACGACTACATTTG--TATAGC 530 Query 6656 TGATCATATTGATTATGAAAAATGGAATAATCACCAAAGAGCAGAGGGAAACAACCCTAC 6715 ||||| | ||||| ||||||||||| | || ||| ||| | || || ||| Sbjct 531 AAATCATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGT 590 Query 6716 CTTCAGGGTTATGGGTCAATTTTTAGGGTACCCA-AATTTGATTGAAAGAACACATGAAA 6774 |||| || ||||| |||||| | ||| || | ||||| || |||||| ||||||| Sbjct 591 ATTCAAAGTGATGGGACAATTTCT-TGGTGCCGAGAATTTATTTACAAGAACGCATGAAA 649 Query 6775 TCTTTGAAAAATCTTGGATATACTATAATCGAAGAGGAGATTTGAT 6820 ||||||| | || || |||||| |||||| ||||| || Sbjct 650 TCTTTGAGAGGAGTTTAATCTACTATCCAGCAAGAGGTGATTTAAT 695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36182577592392