Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031690.1 Length=11308 Score E Sequences producing significant alignments: (Bits) Value seq121975 168 5e-38 >seq121975 Length=4353 Score = 168 bits (186), Expect = 5e-38 Identities = 259/365 (71%), Gaps = 6/365 (2%) Strand=Plus/Minus Query 4511 TCAAAGAATTCATGAGTTCGAG-ATATTAGTTTTGGATACCCAAGAAACTTTCCCATCAC 4569 ||||||| |||||| |||| | | || | || | | ||| |||||| | ||||||||| Sbjct 656 TCAAAGATTTCATGCGTTCTTGTAAATAAATTCTCGGCACC-AAGAAATTGTCCCATCAC 598 Query 4570 ATCAAATACAGGATTATTGGCTTTGGCTCGTTGATGGTTATTCCATTTGCTATAATCAAA 4629 | ||||||||||||||||||| || |||| |||||||||||| ||||| || Sbjct 597 TTTGAATACAGGATTATTGGCTTCTTTTCTCTGATTGTTATTCCATTTCGAGTAATCTAA 538 Query 4630 GTGATTGGCGATACAGATGTTCTCGTACCCTTCACTTCCTTGACCTGAAGTTGTATCCAT 4689 ||||| || ||||| |||| ||||| || | |||||||| || || ||||| Sbjct 537 ATGATTTGCTATACAAATGTAGTCGTAATTGTCTATACCTTGACCCATAGAAGTTTCCAT 478 Query 4690 CATTTTCTTTATGACGGTAGTCATATCATCTGCCATAGTTAGTCCTTTAAACAATGGAAC 4749 ||| |||||| | | ||| | | ||| |||||||| |||| ||| ||||| | ||| || Sbjct 477 CATCTTCTTTGTTAATGTATTTAAATCGTCTGCCATGGTTAATCCCTTAAATAGTGGTAC 418 Query 4750 AAAGTGAGTCTTGATTAGGTGTTCTGTTATTACAAAATA--CTCTCGTAAAGCCCAGGTC 4807 | | || ||||| | || || ||| ||||| || ||| || |||||| | Sbjct 417 ATAATGTTGTTTGATCAAGTACTCGATTAAGACAAAGTAACATCTAGT--CTCCCAGGAC 360 Query 4808 AATAGAGCATAAAATCTTCCTCCAATCTTGATCTCTCGCTCTTTTCCTTTAAGTCCTATG 4867 | || ||| || |||| || |||| || || ||||| |||||| || | | |||||| Sbjct 359 ATTAAAGCGAAATATCTACCAGCAATTTTCATTTCTCGTTCTTTTGCTCTTAATCCTATT 300 Query 4868 ATGAG 4872 || || Sbjct 299 ATCAG 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35984649251936