Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_002640.1 Length=10649 Score E Sequences producing significant alignments: (Bits) Value seq2801 86.0 4e-13 >seq2801 Length=191572 Score = 86.0 bits (94), Expect = 4e-13 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 8916 TATAACATGATGGGAAAACGTGAGAAAAAGTTAGGAGAGTTTGGCAGAGCCAAGGGAAGC 8975 || |||| |||||| || | || || ||| | ||||| |||| || || ||||| Sbjct 184828 TACAACACGATGGGGAAGAGAGATAAGAAGCCCAGGGAGTTCGGCAATGCGAAAGGAAGT 184887 Query 8976 CGAGCAATCTGGTACATGTGGCTGGGAGCGCGGTTTCTGGAATTTGAAGCCCTGGGTTTT 9035 || | |||||||||||||||||| ||| || ||| |||||||||| |||||||| || Sbjct 184888 CGGGTAATCTGGTACATGTGGCTAGGAAGCCGTTTTTTGGAATTTGAGGCCCTGGGCTTC 184947 Query 9036 TTGAATGAAGAT 9047 | || || ||| Sbjct 184948 CTAAACGAGGAT 184959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 33950596059532