Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_005064.1 Length=11375 Score E Sequences producing significant alignments: (Bits) Value seq2801 89.7 4e-14 >seq2801 Length=191572 Score = 89.7 bits (98), Expect = 4e-14 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 8827 TACAACACTATGGGAAAGAAGGAGAAGAAACCGAGCCTGGCTGGTGAGGCCAAGGGATCT 8886 |||||||| ||||| |||| || ||||| || || | || | || || ||| | Sbjct 184828 TACAACACGATGGGGAAGAGAGATAAGAAGCCCAGGGAGTTCGGCAATGCGAAAGGAAGT 184887 Query 8887 CGAACCATCTGGTACATGTGGCTAGGAAGCCGTTTCCTCGAATTTGAGGCTCTTGGTTTC 8946 || ||||||||||||||||||||||||||||| | ||||||||||| || || ||| Sbjct 184888 CGGGTAATCTGGTACATGTGGCTAGGAAGCCGTTTTTTGGAATTTGAGGCCCTGGGCTTC 184947 Query 8947 CTTAACG 8953 || |||| Sbjct 184948 CTAAACG 184954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36273043316596