Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_008604.2 Length=10837 Score E Sequences producing significant alignments: (Bits) Value seq2801 95.1 8e-16 >seq2801 Length=191572 Score = 95.1 bits (104), Expect = 8e-16 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 8783 ATGGTGGCTGATGAACGCGCTCGGCACCTGCGTGGAGATTGTGAGTTGTGCGTGTTCAAC 8842 ||||||| ||| || | | | |||||| | || || || | | ||| ||| |||| Sbjct 184774 ATGGTGGATGAGGAGAGAGAGCTGCACCTCAGGGGTGAGTGCAGGCTATGCTTGTACAAC 184833 Query 8843 ACAATGGGCAAGAAGGAGAAGAAGCCGTCCTCTTTCGGCGAGGCACGAGGATCAAGGATT 8902 || ||||| |||| || |||||||| |||||| | || |||| || | Sbjct 184834 ACGATGGGGAAGAGAGATAAGAAGCCCAGGGAGTTCGGCAATGCGAAAGGAAGTCGGGTA 184893 Query 8903 ATCTGGTACATGTGGCTCGGAAGTCGGTTTTTGGAGTACGAAGCACTTGGATTCCTAAAC 8962 ||||||||||||||||| ||||| || |||||||| | || || || || ||||||||| Sbjct 184894 ATCTGGTACATGTGGCTAGGAAGCCGTTTTTTGGAATTTGAGGCCCTGGGCTTCCTAAAC 184953 Query 8963 GAGGA 8967 ||||| Sbjct 184954 GAGGA 184958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34552001134364