Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_009026.2 Length=10815 Score E Sequences producing significant alignments: (Bits) Value seq3275 87.8 1e-13 >seq3275 Length=417686 Score = 87.8 bits (96), Expect = 1e-13 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 9030 TACAACATGATGGGAAAACGGGAAAAGAAGCTTGGAGAATTTGGAAAAGCGAAGGGAAGC 9089 ||||| | |||||||| ||||| | || | |||||||||| || || || |||||| Sbjct 108604 TACAATACAATGGGAAAGCGGGAGATGAGACCCCGAGAATTTGGCAACGCAAAAGGAAGC 108663 Query 9090 CGAGCTATCTGGTACATGTGGCTGGGGGCCAGGTTCCTTGAATTCGAAGCTTTGGGTTTT 9149 || | ||| |||||||||||| | ||| || ||| | || ||||| || | || ||| Sbjct 108664 CGCGTTATTTGGTACATGTGGTTAGGGAGCATATTCTTAGAGTTCGAGGCCCTAGGATTT 108723 Query 9150 CTGAATGAAGA 9160 |||||||||| Sbjct 108724 TTGAATGAAGA 108734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34481623944756