Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_012932.1 Length=11064 Score E Sequences producing significant alignments: (Bits) Value seq2801 118 7e-23 >seq2801 Length=191572 Score = 118 bits (130), Expect = 7e-23 Identities = 107/133 (80%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 8773 TGTTTATATAACACGATGGGTAAGAAAGAAAAGAAGCCAAGCGTAGCCGGCGAGGCAAAA 8832 || || || ||||||||||| |||| ||| |||||||| || | |||| | || ||| Sbjct 184822 TGCTTGTACAACACGATGGGGAAGAGAGATAAGAAGCCCAGGGAGTTCGGCAATGCGAAA 184881 Query 8833 GGA--TCGAGAACTATCTGGTACATGTGGCTCGGAAGTCGTTTTCTGGAATTTGAGGCCT 8890 ||| ||| | | ||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct 184882 GGAAGTCGGGTA--ATCTGGTACATGTGGCTAGGAAGCCGTTTTTTGGAATTTGAGGCCC 184939 Query 8891 TGGGGTTCCTAAA 8903 |||| |||||||| Sbjct 184940 TGGGCTTCCTAAA 184952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35278165772592